8zt4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:24, 5 February 2025) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8zt4 is ON HOLD until Paper Publication
+
==Complex structure of N-acetyltransferase SbzI and carrier protein SbzG in the biosynthesis of altemicidin==
 +
<StructureSection load='8zt4' size='340' side='right'caption='[[8zt4]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[8zt4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_sp. Streptomyces sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8ZT4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8ZT4 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4HH:O-[(S)-HYDROXY{[(3R)-3-HYDROXY-2,2-DIMETHYL-4-OXO-4-({3-OXO-3-[(2-SULFANYLETHYL)AMINO]PROPYL}AMINO)BUTYL]OXY}PHOSPHORYL]-L-SERINE'>4HH</scene>, <scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8zt4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8zt4 OCA], [https://pdbe.org/8zt4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8zt4 RCSB], [https://www.ebi.ac.uk/pdbsum/8zt4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8zt4 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A3T0ZHG5_STRSQ A0A3T0ZHG5_STRSQ] [https://www.uniprot.org/uniprot/A0A3T0ZHH1_STRSQ A0A3T0ZHH1_STRSQ]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The general control non-repressible 5 (GCN5)-related N-acetyltransferase (GNAT) SbzI, in the biosynthesis of the sulfonamide antibiotic altemicidin, catalyzes the transfer of the 2-sulfamoylacetyl (2-SA) moiety onto 6-azatetrahydroindane dinucleotide. While most GNAT superfamily utilize acyl-coenzyme A (acyl-CoA) as substrates, SbzI recognizes a carrier-protein (CP)-tethered 2-SA substrate. Moreover, SbzI is the only naturally occurring enzyme that catalyzes the direct incorporation of sulfonamide, a valuable pharmacophore in medicinal chemistry. Here, we present the structure-function analysis and structure-based engineering of SbzI. The crystal structure of SbzI in complex with the CP SbzG, along with cross-linking and isothermal titration calorimetry analyses of their variants, revealed the structural basis for CP recognition by the GNAT SbzI. Furthermore, docking simulation, molecular dynamics simulation, and mutagenesis studies indicated the intimate structural details of the unique reaction mechanism of SbzI, which does not utilize a general base residue in contrast to other typical GNATs. These findings facilitated rational engineering of the enzyme to expand the substrate range and to generate azaindane dinucleotide derivatives.
-
Authors: Zhu, Y., Mori, T., Abe, I.
+
Structure-function analysis of carrier protein-dependent 2-sulfamoylacetyl transferase in the biosynthesis of altemicidin.,Zhu Y, Mori T, Karasawa M, Shirai K, Cheng W, Terada T, Awakawa T, Abe I Nat Commun. 2024 Dec 30;15(1):10896. doi: 10.1038/s41467-024-55265-z. PMID:39738057<ref>PMID:39738057</ref>
-
Description: Complex structure of N-acetyltransferase SbzI and carrier protein SbzG in the biosynthesis of altemicidin
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Zhu, Y]]
+
<div class="pdbe-citations 8zt4" style="background-color:#fffaf0;"></div>
-
[[Category: Mori, T]]
+
== References ==
-
[[Category: Abe, I]]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Streptomyces sp]]
 +
[[Category: Abe I]]
 +
[[Category: Mori T]]
 +
[[Category: Zhu Y]]

Current revision

Complex structure of N-acetyltransferase SbzI and carrier protein SbzG in the biosynthesis of altemicidin

PDB ID 8zt4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools