9d32

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Current revision (14:53, 19 February 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9d32 is ON HOLD until Paper Publication
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==Structure of the HKU5 RBD bound to the P. abramus ACE2 receptor==
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<StructureSection load='9d32' size='340' side='right'caption='[[9d32]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9d32]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pipistrellus_abramus Pipistrellus abramus] and [https://en.wikipedia.org/wiki/Pipistrellus_bat_coronavirus_HKU5 Pipistrellus bat coronavirus HKU5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9D32 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9D32 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9d32 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9d32 OCA], [https://pdbe.org/9d32 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9d32 RCSB], [https://www.ebi.ac.uk/pdbsum/9d32 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9d32 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/C7ECT9_PIPAB C7ECT9_PIPAB]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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DPP4 was considered a canonical receptor for merbecoviruses until the recent discovery of African bat-borne MERS-related coronaviruses using ACE2. The extent and diversity of ACE2 utilization among merbecoviruses and their receptor species tropism remain unknown. Here, we reveal that HKU5 enters host cells utilizing Pipistrellus abramus (P.abr) and several non-bat mammalian ACE2s through a binding mode distinct from that of any other known ACE2-using coronaviruses. We defined the molecular determinants of receptor species tropism and identified a single amino acid mutation enabling HKU5 to utilize human ACE2, providing proof of principle for machine-learning-assisted outbreak preparedness. We show that MERS-CoV and HKU5 have markedly distinct antigenicity and identified several HKU5 inhibitors, including two clinical compounds. Our findings profoundly alter our understanding of coronavirus evolution, as several merbecovirus clades independently evolved ACE2 utilization, and pave the way for developing countermeasures against viruses poised for human emergence.
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Authors: Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
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Molecular basis of convergent evolution of ACE2 receptor utilization among HKU5 coronaviruses.,Park YJ, Liu C, Lee J, Brown JT, Ma CB, Liu P, Gen R, Xiong Q, Zepeda SK, Stewart C, Addetia A, Craig CJ, Tortorici MA, Alshukairi AN, Starr TN, Yan H, Veesler D Cell. 2025 Feb 7:S0092-8674(24)01475-2. doi: 10.1016/j.cell.2024.12.032. PMID:39922192<ref>PMID:39922192</ref>
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Description: Structure of the HKU5 RBD bound to the P. abramus ACE2 receptor
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Park, Y.J]]
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<div class="pdbe-citations 9d32" style="background-color:#fffaf0;"></div>
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[[Category: Seattle Structural Genomics Center For Infectious Disease (Ssgcid), Veesler, D]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Pipistrellus abramus]]
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[[Category: Pipistrellus bat coronavirus HKU5]]
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[[Category: Park YJ]]
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[[Category: Veesler D]]

Current revision

Structure of the HKU5 RBD bound to the P. abramus ACE2 receptor

PDB ID 9d32

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