9h9y

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Current revision (08:23, 5 March 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9h9y is ON HOLD until Paper Publication
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==Crystal structure of metal-free LmrR_V15Bpy variant BVS in a closed state==
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<StructureSection load='9h9y' size='340' side='right'caption='[[9h9y]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9h9y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9H9Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9H9Y FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BP5:3-(2,2-BIPYRIDIN-5-YL)-L-ALANINE'>BP5</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9h9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9h9y OCA], [https://pdbe.org/9h9y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9h9y RCSB], [https://www.ebi.ac.uk/pdbsum/9h9y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9h9y ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A2RI36_LACLM A2RI36_LACLM]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Artificial metalloenzymes (ArMs) are an attractive approach to achieving "new to nature" biocatalytic transformations. In this work, a novel copper-dependent artificial Michaelase (Cu_Michaelase) comprising a genetically encoded copper-binding ligand, i. e. (2,2-bipyridin-5-yl)alanine (BpyA), was developed. For the first time, such an ArM containing a non-canonical metal-binding amino acid was successfully optimized through directed evolution. The evolved Cu_Michaelase was applied in the copper-catalyzed asymmetric addition of 2-acetyl azaarenes to nitroalkenes, yielding various gamma-nitro butyric acid derivatives, which are precursors for a range of high-value-added pharmaceutically relevant compounds, with good yields and high enantioselectivities (up to &gt;99 % yield and 99 % ee). Additionally, the evolved variant could be further used in a preparative-scale synthesis, providing chiral products for diverse derivatizations. X-ray crystal structure analysis confirmed the binding of Cu(II) ions to the BpyA residues and showed that, in principle, there is sufficient space for the 2-acetyl azaarene substrate to coordinate. Kinetic studies showed that the increased catalytic efficiency of the evolved enzyme is due to improvements in apparent K(M) for both substrates and a notable threefold increase in apparent k(cat) for 2-acetyl pyridine. This work illustrates the potential of artificial metalloenzymes exploiting non-canonical metal-binding ligands for new-to-nature biocatalysis.
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Authors: Thunnissen, A.M.W.H., Jiang, R., Casilli, F., Aalbers, F., Roelfes, G.
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An Artificial Copper-Michaelase Featuring a Genetically Encoded Bipyridine Ligand for Asymmetric Additions to Nitroalkenes.,Jiang R, Casilli F, Thunnissen AWH, Roelfes G Angew Chem Int Ed Engl. 2025 Feb 13:e202423182. doi: 10.1002/anie.202423182. PMID:39945539<ref>PMID:39945539</ref>
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Description: Crystal structure of metal-free LmrR_V15Bpy variant BVS in a closed state
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Thunnissen, A.M.W.H]]
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<div class="pdbe-citations 9h9y" style="background-color:#fffaf0;"></div>
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[[Category: Roelfes, G]]
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== References ==
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[[Category: Casilli, F]]
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<references/>
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[[Category: Jiang, R]]
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__TOC__
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[[Category: Aalbers, F]]
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</StructureSection>
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[[Category: Lactococcus lactis subsp. cremoris MG1363]]
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[[Category: Large Structures]]
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[[Category: Aalbers F]]
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[[Category: Casilli F]]
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[[Category: Jiang R]]
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[[Category: Roelfes G]]
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[[Category: Thunnissen AMWH]]

Current revision

Crystal structure of metal-free LmrR_V15Bpy variant BVS in a closed state

PDB ID 9h9y

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