2rr4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:29, 26 March 2025) (edit) (undo)
 
Line 1: Line 1:
==Complex structure of the zf-CW domain and the H3K4me3 peptide==
==Complex structure of the zf-CW domain and the H3K4me3 peptide==
-
<StructureSection load='2rr4' size='340' side='right'caption='[[2rr4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2rr4' size='340' side='right'caption='[[2rr4]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2rr4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RR4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2rr4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RR4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2e61|2e61]]</div></td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ZCWPW1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rr4 OCA], [https://pdbe.org/2rr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rr4 RCSB], [https://www.ebi.ac.uk/pdbsum/2rr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rr4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rr4 OCA], [https://pdbe.org/2rr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rr4 RCSB], [https://www.ebi.ac.uk/pdbsum/2rr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rr4 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ZCPW1_HUMAN ZCPW1_HUMAN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rr/2rr4_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rr/2rr4_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 33: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: He, F]]
+
[[Category: He F]]
-
[[Category: Inoue, M]]
+
[[Category: Inoue M]]
-
[[Category: Kigawa, T]]
+
[[Category: Kigawa T]]
-
[[Category: Muto, Y]]
+
[[Category: Muto Y]]
-
[[Category: Structural genomic]]
+
[[Category: Shirouzu M]]
-
[[Category: Shirouzu, M]]
+
[[Category: Terada T]]
-
[[Category: Terada, T]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S]]
+
-
[[Category: Metal-binding protein-nuclear protein complex]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Zcwpw1]]
+
-
[[Category: Zf-cw domain]]
+
-
[[Category: Zinc-finger]]
+

Current revision

Complex structure of the zf-CW domain and the H3K4me3 peptide

PDB ID 2rr4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2rr4"
Personal tools