The Structure and Mechanism of Hexokinase

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Glucokinase includes the <scene name='Kyle_Schroering_Sandbox/1v4s_glucose/2'>glucose binding site (active form)</scene> where glucose forms hydrogen bonds at the bottom of the deep crevice between the large domain and the small domain. E256, E290 (shown in green) of the large domain, T168, K169 (shown in red) of the small domain, and N204, D205 (shown in yellow) of a connecting region form hydrogen bonds with glucose. The <scene name='Kyle_Schroering_Sandbox/Active_form_of_glucokinase/4'>glucose binding site (inactive form)</scene> shows a different conformation. At the <scene name='Kyle_Schroering_Sandbox/1v4s_atp/3'>allosteric site (active form)</scene>, ATP forms hydrogen bonds with R63 and Y215 (shown in orange) and hydrophobically interacts with M210, Y214 (shown in blue) of the α5 helix and V452, V455 (shown in green) of the α13 helix. The <scene name='38/387916/Allosteric/1'>allosteric site (inactive form)</scene> again shows structural differences. The differences in these two conformations allows glucokinase to function properly in different levels of glucose concentration.
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Glucokinase includes the <jmol><jmolLink><script>script "/scripts/Kyle_Schroering_Sandbox/1v4s_glucose/2.spt"; select not *.CB;label off</script><text>glucose binding site (active form)</text></jmolLink></jmol> where glucose forms hydrogen bonds at the bottom of the deep crevice between the large domain and the small domain. E256, E290 (shown in green) of the large domain, T168, K169 (shown in red) of the small domain, and N204, D205 (shown in yellow) of a connecting region form hydrogen bonds with glucose. The <jmol><jmolLink><script>script "/scripts/Kyle_Schroering_Sandbox/Active_form_of_glucokinase/4.spt"; select not *.CB;label off</script><text>glucose binding site (inactive form)</text></jmolLink></jmol> shows a different conformation. At the <jmol><jmolLink><script>script "/scripts/Kyle_Schroering_Sandbox/1v4s_atp/3.spt"; select not *.CB;label off</script><text>allosteric site (active form)</text></jmolLink></jmol>, ATP forms hydrogen bonds with R63 and Y215 (shown in orange) and hydrophobically interacts with M210, Y214 (shown in blue) of the α5 helix and V452, V455 (shown in green) of the α13 helix. The <scene name='38/387916/Allosteric/1'>allosteric site (inactive form)</scene> again shows structural differences. The differences in these two conformations allows glucokinase to function properly in different levels of glucose concentration.
'''Proposed Mechanism for Glucokinase:''' As described above, glucokinase has a distinct conformation change from the active and inactive form. Experiments have also shown an intermediate open form based on analysis of the movement between the active and inactive form. The switch in conformations between the active form and the intermediate is a kinetically faster step than the change between the intermediate and the inactive form. The inactive form of gluckokinase is the thermodynamically favored unless there is glucose present. Glucokinase does not change conformation until the glucose molecule binds. The conformation change may be triggered by the interaction between Asp 205 and the glucose molecule. Once glucokinase is in the active form, the enzymatic reaction is carried out with the presence of ATP. All in all, glucose binds to glucokinase and then is phosphorylated by ATP to produce glucose-6-phosphate and ADP.<ref name="king">PMID:15016359</ref>
'''Proposed Mechanism for Glucokinase:''' As described above, glucokinase has a distinct conformation change from the active and inactive form. Experiments have also shown an intermediate open form based on analysis of the movement between the active and inactive form. The switch in conformations between the active form and the intermediate is a kinetically faster step than the change between the intermediate and the inactive form. The inactive form of gluckokinase is the thermodynamically favored unless there is glucose present. Glucokinase does not change conformation until the glucose molecule binds. The conformation change may be triggered by the interaction between Asp 205 and the glucose molecule. Once glucokinase is in the active form, the enzymatic reaction is carried out with the presence of ATP. All in all, glucose binds to glucokinase and then is phosphorylated by ATP to produce glucose-6-phosphate and ADP.<ref name="king">PMID:15016359</ref>

Current revision

Structure of human Glucokinase complex with sulfate and Na+ ion 1v4t

Drag the structure with the mouse to rotate

3D structures of hexokinase

Hexokinase


Additional Resources

For additional information, see: Carbohydrate Metabolism

References

  1. Pollard-Knight D, Cornish-Bowden A. Mechanism of liver glucokinase. Mol Cell Biochem. 1982 Apr 30;44(2):71-80. PMID:7048063
  2. Koshland D. Induced Fit and Hexokinase.Fig.7 Active Site of Glucokinase/Hexokinase.2010; [1]
  3. Kitto B.G, Caras J., Caras P. Interactive Concepts in Biochemistry. Structural Tutorials.2008; Chp: 15.1, 15.5. [ http://higheredbcs.wiley.com/legacy/college/boyer/0471661791/structure/hexokinase/hexokinase.htm]
  4. 4.0 4.1 4.2 4.3 4.4 Kamata K, Mitsuya M, Nishimura T, Eiki J, Nagata Y. Structural basis for allosteric regulation of the monomeric allosteric enzyme human glucokinase. Structure. 2004 Mar;12(3):429-38. PMID:15016359 doi:10.1016/j.str.2004.02.005
  5. Postic C, Shiota M, Magnuson MA. Cell-specific roles of glucokinase in glucose homeostasis. Recent Prog Horm Res. 2001;56:195-217. PMID:11237213
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