9k2v
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Cyanophage A4 pre-ejectosome== | |
| + | <StructureSection load='9k2v' size='340' side='right'caption='[[9k2v]], [[Resolution|resolution]] 3.40Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[9k2v]] is a 30 chain structure with sequence from [https://en.wikipedia.org/wiki/Anabaena_phage_A-4L Anabaena phage A-4L]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9K2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9K2V FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.4Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9k2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9k2v OCA], [https://pdbe.org/9k2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9k2v RCSB], [https://www.ebi.ac.uk/pdbsum/9k2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9k2v ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A059PYA9_9CAUD A0A059PYA9_9CAUD] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Upon infection, the podophages usually eject a couple of proteins from the capsid to form a transmembrane ejectosome on the host cell membrane that facilitates the ejection of viral genome. However, it remains unclear how these proteins of pre-ejectosome are finely assembled at the center of highly packaged genome. Here, we report the intact structure of Anabaena cyanopodophage A4, which consists of a capsid stabilized by two types of cement proteins and a short tail attached with six tail fibers. Notably, we find a pentameric pre-ejectosome at the core of capsid, which is composed of four ejection proteins wrapped into a coaxial cylinder of triple layers. Moreover, a segment of genomic DNA runs along the positively charged circular cleft formed by two ejection proteins. Based on the mortise-and-tenon architecture of pre-ejectosome in combination with previous studies, we propose a putative DNA packaging process and ejection mechanism for podophages. These findings largely enrich our knowledge on the assembly mechanism of podophages, which might facilitate the application of A4 as a chassis cyanophage in synthetic biology. | ||
| - | + | Cryo-EM structure of cyanopodophage A4 reveals a pentameric pre-ejectosome in the double-stabilized capsid.,Hou P, Zhou RQ, Jiang YL, Yu RC, Du K, Gan N, Ke F, Zhang QY, Li Q, Zhou CZ Proc Natl Acad Sci U S A. 2025 Apr 8;122(14):e2423403122. doi: , 10.1073/pnas.2423403122. Epub 2025 Mar 31. PMID:40163721<ref>PMID:40163721</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 9k2v" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Anabaena phage A-4L]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hou P]] | ||
| + | [[Category: Li Q]] | ||
| + | [[Category: Zhou CZ]] | ||
Current revision
Cyanophage A4 pre-ejectosome
| |||||||||||
