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| <SX load='6ig0' size='340' side='right' viewer='molstar' caption='[[6ig0]], [[Resolution|resolution]] 3.37Å' scene=''> | | <SX load='6ig0' size='340' side='right' viewer='molstar' caption='[[6ig0]], [[Resolution|resolution]] 3.37Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6ig0]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Strtn Strtn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IG0 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6IG0 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6ig0]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_thermophilus_ND03 Streptococcus thermophilus ND03]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IG0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IG0 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.37Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">csm2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=767463 STRTN]), csm3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=767463 STRTN]), csm4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=767463 STRTN]), csm5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=767463 STRTN])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ig0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ig0 OCA], [http://pdbe.org/6ig0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ig0 RCSB], [http://www.ebi.ac.uk/pdbsum/6ig0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ig0 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ig0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ig0 OCA], [https://pdbe.org/6ig0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ig0 RCSB], [https://www.ebi.ac.uk/pdbsum/6ig0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ig0 ProSAT]</span></td></tr> |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| </SX> | | </SX> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Strtn]] | + | [[Category: Streptococcus thermophilus ND03]] |
- | [[Category: Ma, J]] | + | [[Category: Ma J]] |
- | [[Category: Wang, J]] | + | [[Category: Wang J]] |
- | [[Category: Wang, Y]] | + | [[Category: Wang Y]] |
- | [[Category: You, L]] | + | [[Category: You L]] |
- | [[Category: Zhang, X]] | + | [[Category: Zhang X]] |
- | [[Category: Crispr-cas system]]
| + | |
- | [[Category: Csm complex]]
| + | |
- | [[Category: Rna binding protein]]
| + | |
- | [[Category: Type iii-a]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Csm, a type III-A CRISPR-Cas interference complex, is a CRISPR RNA (crRNA)-guided RNase that also possesses target RNA-dependent DNase and cyclic oligoadenylate (cOA) synthetase activities. However, the structural features allowing target RNA-binding-dependent activation of DNA cleavage and cOA generation remain unknown. Here, we report the structure of Csm in complex with crRNA together with structures of cognate or non-cognate target RNA bound Csm complexes. We show that depending on complementarity with the 5' tag of crRNA, the 3' anti-tag region of target RNA binds at two distinct sites of the Csm complex. Importantly, the interaction between the non-complementary anti-tag region of cognate target RNA and Csm1 induces a conformational change at the Csm1 subunit that allosterically activates DNA cleavage and cOA generation. Together, our structural studies provide crucial insights into the mechanistic processes required for crRNA-meditated sequence-specific RNA cleavage, RNA target-dependent non-specific DNA cleavage, and cOA generation.
Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference.,You L, Ma J, Wang J, Artamonova D, Wang M, Liu L, Xiang H, Severinov K, Zhang X, Wang Y Cell. 2018 Nov 26. pii: S0092-8674(18)31451-X. doi: 10.1016/j.cell.2018.10.052. PMID:30503210[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ You L, Ma J, Wang J, Artamonova D, Wang M, Liu L, Xiang H, Severinov K, Zhang X, Wang Y. Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference. Cell. 2018 Nov 26. pii: S0092-8674(18)31451-X. doi: 10.1016/j.cell.2018.10.052. PMID:30503210 doi:http://dx.doi.org/10.1016/j.cell.2018.10.052
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