9j8v

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Current revision (11:28, 16 April 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9j8v is ON HOLD until sometime in the future
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==TSWV L protein in complex with ribavirin 5-triphosphate==
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<StructureSection load='9j8v' size='340' side='right'caption='[[9j8v]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9j8v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Orthotospovirus_tomatomaculae Orthotospovirus tomatomaculae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9J8V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9J8V FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RTP:RIBAVIRIN+TRIPHOSPHATE'>RTP</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9j8v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9j8v OCA], [https://pdbe.org/9j8v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9j8v RCSB], [https://www.ebi.ac.uk/pdbsum/9j8v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9j8v ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A7G8JUQ9_TSWV A0A7G8JUQ9_TSWV]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Despite the discovery of plant viruses as a new class of pathogens over a century ago, the structure of plant virus replication machinery and antiviral pesticide remains lacking. Here we report five cryogenic electron microscopy structures of a ~330-kDa RNA-dependent RNA polymerase (RdRp) from a devastating plant bunyavirus, tomato spotted wilt orthotospovirus (TSWV), including the apo, viral-RNA-bound, base analogue ribavirin-bound and ribavirin-triphosphate-bound states. They reveal that a flexible loop of RdRp's motif F functions as 'sensor' to perceive viral RNA and further acts as an 'adaptor' to promote the formation of a complete catalytic centre. A ten-base RNA 'hook' structure is sufficient to trigger major conformational changes and activate RdRp. Chemical screening showed that ribavirin is effective against TSWV, and structural data revealed that ribavirin disrupts both hook-binding and catalytic core formation, locking polymerase in its inactive state. This work provides structural insights into the mechanisms of plant bunyavirus RdRp activation and its dual-targeted site inhibition, facilitating the development of pesticides against plant viruses.
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Authors: Cao, L., Wang, X.
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Structural basis for the activation of plant bunyavirus replication machinery and its dual-targeted inhibition by ribavirin.,Li J, Cao L, Zhao Y, Shen J, Wang L, Feng M, Zhu M, Ye Y, Kormelink R, Tao X, Wang X Nat Plants. 2025 Mar;11(3):518-530. doi: 10.1038/s41477-025-01940-y. Epub 2025 , Mar 5. PMID:40044941<ref>PMID:40044941</ref>
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Description: TSWV L protein in complex with ribavirin 5-triphosphate
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Cao, L]]
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<div class="pdbe-citations 9j8v" style="background-color:#fffaf0;"></div>
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[[Category: Wang, X]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Orthotospovirus tomatomaculae]]
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[[Category: Cao L]]
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[[Category: Wang X]]

Current revision

TSWV L protein in complex with ribavirin 5-triphosphate

PDB ID 9j8v

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