JMS/Sandbox/msn2 1
From Proteopedia
(Difference between revisions)
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==Your Heading Here (maybe something like 'Structure')== | ==Your Heading Here (maybe something like 'Structure')== | ||
<StructureSection size='340' side='right' caption='Caption for this structure' scene='10/1080617/Msn2/1'> | <StructureSection size='340' side='right' caption='Caption for this structure' scene='10/1080617/Msn2/1'> | ||
+ | |||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; wireframe off; spacefill off; labels off; set ambientPercent 85; set diffusePercent 85;</script><text>Show Overall Structure</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; spin on; wireframe off; spacefill off;</script><text>Rotate Structure</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; spin off; cartoon; color chain; select 647-665; color red; wireframe off; spacefill off; zoom 400; center selected;</script><text>Zoom to Zinc Finger 1 (647-665)</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; select 676-698; color blue; wireframe off; spacefill off; zoom 400; center selected;</script><text>Zoom to Zinc Finger 2 (676-698)</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; select 237-327; color green; wireframe off; spacefill off; zoom 200; center selected;</script><text>Highlight NES Region (237-327)</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; select 576-648; color magenta; wireframe off; spacefill off; zoom 200; center selected;</script><text>Highlight NLS Region (576-648)</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; wireframe off; select protein; trace only; select 288,304; spacefill 120; color yellow; center selected; zoom 300;</script><text>Show NES Phosphorylation Sites</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; wireframe off; select protein; trace only; select 582,620,625,633; spacefill 120; color yellow; center selected; zoom 300;</script><text>Show NLS Phosphorylation Sites</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; select 647-698; color purple; wireframe off; spacefill off; select ZN; spacefill 120; color cpk; zoom 350; center selected;</script><text>DNA Binding Domain with Zinc</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; set cartoonFancy true; cartoon; color structure; select helix; color red; select sheet; color yellow; select turn; color green; select ZN; spacefill; color cpk; zoom 150;</script><text>Show Secondary Structure</text></jmolButton></jmol> | ||
+ | <jmol><jmolButton><script>select all; cartoon; color chain; wireframe off; spacefill off; labels off; spin off; zoom 100; center all;</script><text>Reset View</text></jmolButton></jmol> | ||
+ | |||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script> | ||
+ | select 640-704; cartoon; color bfactor; | ||
+ | spacefill 0.5; color cpk; | ||
+ | </script> | ||
+ | <text>Putative Zn-Coordinating Cys/His</text> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script> | ||
+ | select 570-650; cartoon; color magenta; | ||
+ | select 582,620,625,633; spacefill off; | ||
+ | select 576-648 and (lys or arg); spacefill 0.7; color blue; | ||
+ | </script> | ||
+ | <text>Basic Residues in NLS</text> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
incorporate | incorporate |
Revision as of 20:12, 19 May 2025
Your Heading Here (maybe something like 'Structure')
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