User:Vinícius M. Neto/Sandbox 1

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You may include any references to papers as in: the use of JSmol in Proteopedia ^[1] or to the article describing Jmol ^[2] to the rescue.

Basic structure

The N-Terminal domain of the fibroin heavy chain (fibNT) is a homo 4-mer with mostly (hidrophilic amino acids in marron and hidrophobic in medium blue)

Oligomerization

At a neutral pH, the FibNT exists in a random coil state, which prevents premature formation of β-sheets. As the pH decreases to around 6.0, FibNT undergoes a structural transition to form β-sheets. This pH drop mirrors the natural process occurring as fibroin moves from the posterior to the anterior silk gland of the silkworm.FibNT undergoes a conformational change from a random coil to β-sheets when the pH decreases to around 6.0. This transition is critical for dimerization and subsequent oligomerization.

Dynamic light scattering (DLS) and electron microscopy (EM) show that FibNT forms micelle-like oligomers as pH decreases. This suggests that FibNT acts as a pH-sensitive module, initiating self-assembly under acidic conditions similar to those in the silk gland lumen.

Relevance

Structural highlights

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