8ho3

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Current revision (11:29, 18 June 2025) (edit) (undo)
 
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==Capsid of DT57C bacteriophage in the full state==
==Capsid of DT57C bacteriophage in the full state==
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<StructureSection load='8ho3' size='340' side='right'caption='[[8ho3]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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<SX load='8ho3' size='340' side='right' viewer='molstar' caption='[[8ho3]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[8ho3]] is a 13 chain structure with sequence from [https://en.wikipedia.org/wiki/Tequintavirus Tequintavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8HO3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8HO3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[8ho3]] is a 13 chain structure with sequence from [https://en.wikipedia.org/wiki/Tequintavirus Tequintavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8HO3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8HO3 FirstGlance]. <br>
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== Function ==
== Function ==
[https://www.uniprot.org/uniprot/A0A0A7RSM1_9CAUD A0A0A7RSM1_9CAUD]
[https://www.uniprot.org/uniprot/A0A0A7RSM1_9CAUD A0A0A7RSM1_9CAUD]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The T5 family of viruses are tailed bacteriophages characterized by a long non-contractile tail. The bacteriophage DT57C is closely related to the paradigmal T5 phage, though it recognizes a different receptor (BtuB) and features highly divergent lateral tail fibers (LTF). Considerable portions of T5-like phages remain structurally uncharacterized. Here, we present the structure of DT57C determined by cryo-EM, and an atomic model of the virus, which was further explored using all-atom molecular dynamics simulations. The structure revealed a unique way of LTF attachment assisted by a dodecameric collar protein LtfC, and an unusual composition of the phage neck constructed of three protein rings. The tape measure protein (TMP) is organized within the tail tube in a three-stranded parallel alpha-helical coiled coil which makes direct contact with the genomic DNA. The presence of the C-terminal fragment of the TMP that remains within the tail tip suggests that the tail tip complex returns to its original state after DNA ejection. Our results provide a complete atomic structure of a T5-like phage, provide insights into the process of DNA ejection as well as a structural basis for the design of engineered phages and future mechanistic studies.
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Nearly complete structure of bacteriophage DT57C reveals architecture of head-to-tail interface and lateral tail fibers.,Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M Nat Commun. 2023 Dec 11;14(1):8205. doi: 10.1038/s41467-023-43824-9. PMID:38081816<ref>PMID:38081816</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 8ho3" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
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</StructureSection>
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</SX>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Tequintavirus]]
[[Category: Tequintavirus]]

Current revision

Capsid of DT57C bacteriophage in the full state

8ho3, resolution 2.90Å

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