Kinesin 3D Structures
From Proteopedia
(Difference between revisions)
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| + | |||
| + | *KIF1 heavy chain | ||
| + | |||
| + | **[[5lt0]], [[5lt1]], [[5lt2]], [[5lt3]], [[5lt4]], [[9l6k]], [[9l78]] – hKHC (mutant) - human<br /> | ||
| + | **[[7rik]] – hKHC - NMR<br /> | ||
| + | **[[1mkj, [[5lt0]]]] – hKHC + ADP<br /> | ||
| + | **[[9l7e]] – hKHC (mutant) + ADP<br /> | ||
| + | **[[1bg2]] – hKHC MD <br /> | ||
| + | **[[3j8x]], [[3j8y]] – hKHC MD + GTP + GDP + tubulin<br /> | ||
| + | **[[6ojq]] – hKHC MD + Tubulin + G2P + GTP – Cryo EM<br /> | ||
| + | **[[4lnu]] – hKHC + Tubulin + designed ankyrin repeat | ||
| + | **[[4hna]] – hKHC + Tubulin + designed ankyrin repeat protein + Mg-ADP + GDP + GTP + AlF4<br /> | ||
| + | **[[9l7m]] – hKHC MD + GTP + tubulin – Cryo EM<br /> | ||
| + | **[[8ixb]], [[8ixd]], [[8ixe]] – hKHC MD + Tubulin + GMPCPP – Cryo EM<br /> | ||
| + | **[[8rhb]], [[8rhh]] – hKHC + Tubulin + AMPPNP – Cryo EM<br /> | ||
| + | **[[8rik]], [[8riz]], [[9gnq]] – hKHC + Tubulin + ADP + GDP + GTP – Cryo EM<br /> | ||
| + | **[[6ign]], [[6igv]] – mKHC coiled coil domain 444-566 <br /> | ||
| + | **[[4atx]] - rKHC MD+ Tubulin – rat - Cryo EM<br /> | ||
*KIF1A, KIF1B, KIF1C or kinesin-3 | *KIF1A, KIF1B, KIF1C or kinesin-3 | ||
| - | **[[1bg2]] – hKIF MD - human<br /> | ||
| - | **[[4hna]], [[4lnu]] – hKIF1 + Tubulin + designed ankyrin repeat protein + Mg-ADP + GDP + GTP + AlF4<br /> | ||
**[[4uxy]] – hKIF1 MD + Tubulin + GDP + GTP – Cryo EM<br /> | **[[4uxy]] – hKIF1 MD + Tubulin + GDP + GTP – Cryo EM<br /> | ||
| - | **[[6ojq]] – hKIF1 MD + Tubulin + G2P + GTP – Cryo EM<br /> | ||
**[[4uy0]] – hKIF1 MD + Tubulin + GDP + GTP + ADP – Cryo EM<br /> | **[[4uy0]] – hKIF1 MD + Tubulin + GDP + GTP + ADP – Cryo EM<br /> | ||
**[[4uxo]], [[4uxp]], [[4uxr]], [[4uxs]], [[4uxt]] - hKIF + tubulin 1B, 2B chains + GDP + GTP – Cryo EM <br /> | **[[4uxo]], [[4uxp]], [[4uxr]], [[4uxs]], [[4uxt]] - hKIF + tubulin 1B, 2B chains + GDP + GTP – Cryo EM <br /> | ||
**[[2p4n]] – hKIF+ Tubulin – EM docking<br /> | **[[2p4n]] – hKIF+ Tubulin – EM docking<br /> | ||
| - | **[[1mkj]] – hKIF MD+docked FNL<br /> | ||
**[[6zph]] – hKIF MD + KIF-binding protein – Cryo EM<br /> | **[[6zph]] – hKIF MD + KIF-binding protein – Cryo EM<br /> | ||
| + | **[[9ko8]] – hKIF1C 714-809 + Hook3 553-624 <br /> | ||
**[[2wbe]] – bKIF MD+FNL+Tubulin +AMPPNP – bovine <br /> | **[[2wbe]] – bKIF MD+FNL+Tubulin +AMPPNP – bovine <br /> | ||
**[[3edl]] – bKIF MD+ Tubulin – EM<br /> | **[[3edl]] – bKIF MD+ Tubulin – EM<br /> | ||
| - | **[[ | + | **[[8tt7]] - rKIF neck 325-376 - NMR<br /> |
*KIF-like 1A, KIF-like 1B, KIF-like 1C | *KIF-like 1A, KIF-like 1B, KIF-like 1C | ||
**[[4ejq]], [[4egx]] – hKIFL 1A CC1-FHA domain 430-607<br /> | **[[4ejq]], [[4egx]] – hKIFL 1A CC1-FHA domain 430-607<br /> | ||
| - | **[[ | + | **[[8uts]] – hKIFL 1A MD + tubulin – Cryo EM <br /> |
| + | **[[8utn]], [[8uto]], [[8utp]], [[8utq]], [[8uty]] – hKIFL 1A MD + tubulin + ANP + GDP + GTP – Cryo EM <br /> | ||
| + | **[[8utr]] – hKIFL 1A MD + tubulin + ADP – Cryo EM <br /> | ||
| + | **[[8utv]] – hKIFL 1A MD (mutant) + tubulin + ADP – Cryo EM <br /> | ||
| + | **[[8utt]], [[8utu]], [[8utw]] – hKIFL 1A MD (mutant) + tubulin + ANP + GDP + GTP – Cryo EM <br /> | ||
**[[2g1l]] – hKIFL 1C FHA domain<br /> | **[[2g1l]] – hKIFL 1C FHA domain<br /> | ||
**[[5wdh]] – hKIFL 1C MD<br /> | **[[5wdh]] – hKIFL 1C MD<br /> | ||
| + | **[[2rep]] – hKIFL 1C MD<br /> | ||
**[[2eh0]] – hKIFL 1B FHA domain – NMR<br /> | **[[2eh0]] – hKIFL 1B FHA domain – NMR<br /> | ||
**[[2hxh]] – pKIFL 1A head+ADP - pig<br /> | **[[2hxh]] – pKIFL 1A head+ADP - pig<br /> | ||
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**[[2gry]] – hKIFL 2+ADP<br /> | **[[2gry]] – hKIFL 2+ADP<br /> | ||
**[[6bbn]] – hKIFL 2A MD + Tubulin + Darpin<br /> | **[[6bbn]] – hKIFL 2A MD + Tubulin + Darpin<br /> | ||
| + | **[[9j20]], [[9jwv]] – hKIFL 2A MD + WDR5<br /> | ||
**[[5mio]] – hKIFL 2C MD + Tubulin <br /> | **[[5mio]] – hKIFL 2C MD + Tubulin <br /> | ||
**[[1v8j]], [[5xja]], [[5xjb]] – mKIFL 2C MD+Mg-ADP<br /> | **[[1v8j]], [[5xja]], [[5xjb]] – mKIFL 2C MD+Mg-ADP<br /> | ||
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**[[1v8k]] – mKIFL 2C MD+Mg-AMPPNP<br /> | **[[1v8k]] – mKIFL 2C MD+Mg-AMPPNP<br /> | ||
**[[2vvg]] – KIF2 MD – ''Giardia intestinalis''<br /> | **[[2vvg]] – KIF2 MD – ''Giardia intestinalis''<br /> | ||
| + | |||
| + | *KIF-like 3A, KIF-like 3B | ||
| + | |||
| + | **[[9w9i]] – hKIFL 3A + hKIFL 3B + KAP3 + mAPC – Cryo EM<br /> | ||
| + | **[[9w9h]] – hKIFL 3A + hKIFL 3B + KAP3 – Cryo EM<br /> | ||
*KIF-like 3B, KIF-like 3C or kinesin-2 | *KIF-like 3B, KIF-like 3C or kinesin-2 | ||
**[[3b6u]], [[3b6v]] – hKIFL 3B MD<br /> | **[[3b6u]], [[3b6v]] – hKIFL 3B MD<br /> | ||
| - | **[[5wde]] – hKIFL 3C+ADP<br /> | + | **[[2h58]], [[5wde]] – hKIFL 3C+ADP<br /> |
*KIF4A, KIF4B or kinesin-4 | *KIF4A, KIF4B or kinesin-4 | ||
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*KIF5B, KIF5C or kinesin-1 | *KIF5B, KIF5C or kinesin-1 | ||
| - | **[[6ign]], [[6igv]] – mKIF5B coiled coil domain 444-566 <br /> | ||
**[[3wrd]] – mKIF5C<br /> | **[[3wrd]] – mKIF5C<br /> | ||
**[[3x2t]] – mKIF5C + ADP<br /> | **[[3x2t]] – mKIF5C + ADP<br /> | ||
**[[3j6h]] – mKIF5C MD+Mg-GTP + G2P + tubulin <br /> | **[[3j6h]] – mKIF5C MD+Mg-GTP + G2P + tubulin <br /> | ||
| - | **[[3j8x]], [[3j8y]] – | + | **[[3j8x]], [[3j8y]] – hKIF5C MD+ GTP + GDP + tubulin<br /> |
**[[2y5w]], [[2y65]] - DmKIF MD – Drosophila melanogasgter<br /> | **[[2y5w]], [[2y65]] - DmKIF MD – Drosophila melanogasgter<br /> | ||
**[[4pxt]], [[4pxu]] – DmKIF MD (mutant)<br /> | **[[4pxt]], [[4pxu]] – DmKIF MD (mutant)<br /> | ||
**[[1n6m]] – DmKIF MD+FNL<br /> | **[[1n6m]] – DmKIF MD+FNL<br /> | ||
**[[3l1c]] – DmNCD (mutant)<br /> | **[[3l1c]] – DmNCD (mutant)<br /> | ||
| + | |||
| + | *KIF-like 6 | ||
| + | |||
| + | **[[7wrg]] - CeKIFL - Caenorhabditis elegans<br /> | ||
*KIF-like 7 or kinesin-4 | *KIF-like 7 or kinesin-4 | ||
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**[[6mlq]] – hKIFL 7 MD + Tubulin + GTP + GDP + ADP – Cryo EM<br /> | **[[6mlq]] – hKIFL 7 MD + Tubulin + GTP + GDP + ADP – Cryo EM<br /> | ||
**[[7rx0]] – hKIFL 7 MD + GLI2 ANTubulin + GTP + GDP + G2P – Cryo EM<br /> | **[[7rx0]] – hKIFL 7 MD + GLI2 ANTubulin + GTP + GDP + G2P – Cryo EM<br /> | ||
| + | |||
| + | *KIF8B | ||
| + | |||
| + | **[[7z2a]], [[7z2b]], [[7z2c]] – KIF8B + pTUBA+pTUBB +G2P + GTP – Plasmodium berghei – Cryo EM <br /> | ||
| + | |||
| + | *KIF-like 8 | ||
| + | |||
| + | **[[9crw]] – hKIFL 8 474-705 <br /> | ||
*KIF-like 9 or kinesin-9 | *KIF-like 9 or kinesin-9 | ||
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**[[4bxn]], [[4as7]] – hKIFL 11+inhibitor +ADP + Cd<br /> | **[[4bxn]], [[4as7]] – hKIFL 11+inhibitor +ADP + Cd<br /> | ||
**[[3l9h]] – hKIFL 11+inhibitor +ADP <br /> | **[[3l9h]] – hKIFL 11+inhibitor +ADP <br /> | ||
| - | **[[4zhi]] – hKIFL 11 MD +ADP<br /> | + | **[[4zhi]], [[8yhh]] – hKIFL 11 MD +ADP<br /> |
**[[1x88]], [[1q0b]] – hKIFL 11 +Mg + ADP+monastrol <br /> | **[[1x88]], [[1q0b]] – hKIFL 11 +Mg + ADP+monastrol <br /> | ||
**[[4ap0]], [[4a5y]] – hKIFL 11 +MgADP + ispinesib + Mg<br /> | **[[4ap0]], [[4a5y]] – hKIFL 11 +MgADP + ispinesib + Mg<br /> | ||
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**[[5m5i]], [[5m5l]], [[5m5m]], [[5m5n]], [[5m5o]] – fyKIFL Cut7 MD + tubulin + GDP + GTP + ANP + taxol – fission yeast – Cryo EM<br /> | **[[5m5i]], [[5m5l]], [[5m5m]], [[5m5n]], [[5m5o]] – fyKIFL Cut7 MD + tubulin + GDP + GTP + ANP + taxol – fission yeast – Cryo EM<br /> | ||
**[[6s8m]] – fyKIFL Cut7 MD + tubulin + GDP + GTP + ANP – Cryo EM<br /> | **[[6s8m]] – fyKIFL Cut7 MD + tubulin + GDP + GTP + ANP – Cryo EM<br /> | ||
| + | **[[9ikb]] – CeKIFL 11 + CeKIFL 20 + KAP <br /> | ||
*KIF11 | *KIF11 | ||
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**[[7nb8]] – PfKIF MD + tubulin + GTP + G2P – ''Plasmodium falciparum'' – Cryo EM<br /> | **[[7nb8]] – PfKIF MD + tubulin + GTP + G2P – ''Plasmodium falciparum'' – Cryo EM<br /> | ||
**[[7nba]] – PfKIF MD + tubulin + GTP + G2P + ANP – Cryo EM<br /> | **[[7nba]] – PfKIF MD + tubulin + GTP + G2P + ANP – Cryo EM<br /> | ||
| + | |||
| + | * KIF-like 12 | ||
| + | |||
| + | **[[7x4n]] – CeKIFL 12 MD + tubulin + darpin + GDP + GTP + ANP – Cryo EM<br /> | ||
*KIF13A, KIF13B or kinesin-3 | *KIF13A, KIF13B or kinesin-3 | ||
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**[[5djo]] – mKIFL 13A CC1-FHA domain <br /> | **[[5djo]] – mKIFL 13A CC1-FHA domain <br /> | ||
**[[5djn]] – mKIFL 13A coiled-coil domain (mutant)<br /> | **[[5djn]] – mKIFL 13A coiled-coil domain (mutant)<br /> | ||
| + | |||
| + | *KIF14 | ||
| + | |||
| + | **[[8yue]] – DmKIF14 + Tubulin + ADP – Cryo EM<br /> | ||
| + | **[[8yy2]], [[8yy3]], [[8yy4]], [[8yy5]] – DmKIF14 (mutant) + Tubulin + GTP + GDP + ADP – Cryo EM<br /> | ||
*KIF-like 14 or kinesin-3 | *KIF-like 14 or kinesin-3 | ||
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**[[5oam]] – hKIFL 18A MD + tubulin + GTP<br /> | **[[5oam]] – hKIFL 18A MD + tubulin + GTP<br /> | ||
**[[5ocu]] – hKIFL 18A MD + tubulin + GTP + GDP + ANP<br /> | **[[5ocu]] – hKIFL 18A MD + tubulin + GTP + GDP + ANP<br /> | ||
| + | **[[9di0]] – hKIFL 18A MD + tubulin + GTP + GDP + ATP – Cryo EM<br /> | ||
**[[5ogc]] – hKIFL 18A MD + tubulin + GTP + GDP + taxol<br /> | **[[5ogc]] – hKIFL 18A MD + tubulin + GTP + GDP + taxol<br /> | ||
**[[7rsi]] – hKIFL 18A MD + KIF-binding protein + ADP – Cryo EM<br /> | **[[7rsi]] – hKIFL 18A MD + KIF-binding protein + ADP – Cryo EM<br /> | ||
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**[[6yip]] – hKIFL 20A coiled coil domain 596-668 <br /> | **[[6yip]] – hKIFL 20A coiled coil domain 596-668 <br /> | ||
| + | **[[8bjs]] – mKIFL 20A 55-510<br /> | ||
**[[5nd3]] – mKIFL 20A MD + tubulin <br /> | **[[5nd3]] – mKIFL 20A MD + tubulin <br /> | ||
**[[5nd2]], [[5nd4]] – mKIFL 20A MD + tubulin + ADP <br /> | **[[5nd2]], [[5nd4]] – mKIFL 20A MD + tubulin + ADP <br /> | ||
**[[5nd7]] – mKIFL 20A MD + tubulin + AMPPNP <br /> | **[[5nd7]] – mKIFL 20A MD + tubulin + AMPPNP <br /> | ||
| + | **[[8f18]], [[8f1a]] – mKIFL 20A MD + tubulin + GDP + GTP <br /> | ||
**[[5lef]] – mKIFL 20A residues 603-665 + RAB-6 <br /> | **[[5lef]] – mKIFL 20A residues 603-665 + RAB-6 <br /> | ||
| - | **[[5x3e]] - | + | **[[5x3e]] - CeKIFL MD <br /> |
*KIF-like 21A or kinesin-4 | *KIF-like 21A or kinesin-4 | ||
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**[[2edu]] – hKIFL 22 C-terminal – NMR<br /> | **[[2edu]] – hKIFL 22 C-terminal – NMR<br /> | ||
| + | **[[3bfn]] – hKIFL 22 MD<br /> | ||
**[[6nje]] – hKIFL 22 MD +ADP<br /> | **[[6nje]] – hKIFL 22 MD +ADP<br /> | ||
Revision as of 10:08, 20 October 2025
3D Structures of Kinesin
Updated on 20-October-2025
