9kup

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Current revision (09:15, 22 October 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9kup is ON HOLD until Paper Publication
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==Crystal structure of MCP2201LBD==
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<StructureSection load='9kup' size='340' side='right'caption='[[9kup]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9kup]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Comamonas_thiooxydans Comamonas thiooxydans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9KUP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9KUP FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MLT:D-MALATE'>MLT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9kup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9kup OCA], [https://pdbe.org/9kup PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9kup RCSB], [https://www.ebi.ac.uk/pdbsum/9kup PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9kup ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0ABF7PFR0_9BURK A0ABF7PFR0_9BURK]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bacterial chemoreceptors sense extracellular stimuli and drive bacteria toward a beneficial environment or away from harm. Their ligand-binding domains (LBDs) are highly diverse in terms of sequence and structure, and their ligands cover various chemical molecules that could serve as nitrogen, carbon, and energy sources. The mechanism of how this diverse range of LBDs senses different ligands is essential to signal transduction. Previously, we reported that the chemoreceptor MCP2201 from Comamonas testosteroni CNB-1 sensed citrate and L-malate, altered the ligand-free monomer-dimer equilibrium of LBD to citrate-bound monomer (with limited monomer) and L-malate-bound dimer, and triggered positive and negative chemotactic responses. Here, we present our findings, showing that D-malate binds to MCP2201, induces LBD dimerization, and triggers the chemorepellent response exactly as L-malate did. A single site mutation, T105A, can alter the D-malate-bound LBD dimer into a monomer-dimer equilibrium and switch the negative chemotactic response to D-malate to a positive one. Differences in attractant-bound LBD oligomerization, such as citrate-bound wildtype LBD monomer and D-malate-bound T105A dimer, indicated that LBD oligomerization is a consequence of signal transduction instead of a trigger. Our study expands our knowledge of chemoreceptor-sensing ligands and provides insight into the evolution of bacterial chemoreceptors.
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Authors: Cui, R., Li, D.F.
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Insights into Chemoreceptor MCP2201-Sensing D-Malate.,Cui R, Li J, Hong Y, Guo L, Wang YH, Bai YF, Li DF Int J Mol Sci. 2025 May 20;26(10):4902. doi: 10.3390/ijms26104902. PMID:40430039<ref>PMID:40430039</ref>
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Description: Crystal structure of MCP2201LBD
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Li, D.F]]
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<div class="pdbe-citations 9kup" style="background-color:#fffaf0;"></div>
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[[Category: Cui, R]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Comamonas thiooxydans]]
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[[Category: Large Structures]]
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[[Category: Cui R]]
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[[Category: Li DF]]

Current revision

Crystal structure of MCP2201LBD

PDB ID 9kup

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