7ib7

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Current revision (07:18, 12 November 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7ib7 is ON HOLD
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==Crystal structure of Zika NS2B-NS3 protease in complex with fragment EOS103119 from ECBL-96==
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<StructureSection load='7ib7' size='340' side='right'caption='[[7ib7]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7ib7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Zika_virus Zika virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7IB7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7IB7 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1CDN:4-methoxy-2,3-dihydro-1H-isoindole'>A1CDN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ib7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ib7 OCA], [https://pdbe.org/7ib7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ib7 RCSB], [https://www.ebi.ac.uk/pdbsum/7ib7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ib7 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A142IX72_ZIKV A0A142IX72_ZIKV]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Quite frequently, it is the progression of initial crystallographic fragment screening hits into more potent binders to their target, which constitutes the major bottleneck in many academic compound or drug development projects. While high quality starting points are critical to the success of a drug development project, it is equally important to have accessible pathways for further compound development. Here, we present two crystallographic fragment screening campaigns using a 96 fragment sub-selection of the European Fragment Screening Library (EFSL) provided by EU-OPENSCREEN. The two campaigns against the targets endothiapepsin and the NS2B-NS3 Zika protease, yielded hit rates of 31% and 18%, respectively. Further, we present how within the framework of the EU-OPENSCREEN European Research Infrastructure Consortium (ERIC) fast identification of follow-up compounds can be realized. With just one round of testing related compounds from the European Chemical Biology Library, two follow-up binders for each of the two targets could be identified proving the feasibility of this approach.
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Authors: Benz, L.S., Wollenhaupt, J., Jirgensons, A., Miletic, T., Mueller, U., Weiss, M.S.
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From fragments to follow-ups: rapid hit expansion by making use of EU-OPENSCREEN resources.,Benz LS, Wollenhaupt J, Jirgensons A, Miletic T, Mueller U, Weiss MS RSC Med Chem. 2025 Oct 22. doi: 10.1039/d5md00684h. PMID:41132859<ref>PMID:41132859</ref>
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Description: Crystal structure of Zika NS2B-NS3 protease in complex with fragment EOS103119 from ECBL-96
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Wollenhaupt, J]]
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<div class="pdbe-citations 7ib7" style="background-color:#fffaf0;"></div>
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[[Category: Benz, L.S]]
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== References ==
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[[Category: Jirgensons, A]]
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<references/>
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[[Category: Mueller, U]]
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__TOC__
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[[Category: Weiss, M.S]]
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</StructureSection>
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[[Category: Miletic, T]]
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[[Category: Large Structures]]
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[[Category: Zika virus]]
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[[Category: Benz LS]]
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[[Category: Jirgensons A]]
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[[Category: Miletic T]]
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[[Category: Mueller U]]
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[[Category: Weiss MS]]
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[[Category: Wollenhaupt J]]

Current revision

Crystal structure of Zika NS2B-NS3 protease in complex with fragment EOS103119 from ECBL-96

PDB ID 7ib7

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