9kh4

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Current revision (07:30, 12 November 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9kh4 is ON HOLD until Paper Publication
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==Crystal structure of Galectin-8 N-CRD with N-acetyllactosamine==
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<StructureSection load='9kh4' size='340' side='right'caption='[[9kh4]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9kh4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9KH4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9KH4 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=RNQ:~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-5-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2,4-bis(oxidanyl)oxan-3-yl]ethanamide'>RNQ</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9kh4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9kh4 OCA], [https://pdbe.org/9kh4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9kh4 RCSB], [https://www.ebi.ac.uk/pdbsum/9kh4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9kh4 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LEG8_HUMAN LEG8_HUMAN] Lectin with a marked preference for 3'-O-sialylated and 3'-O-sulfated glycans.<ref>PMID:21288902</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Alpha-1 Antitrypsin (AAT) is a serine protease inhibitor that protects lung tissue by neutralizing neutrophil elastase. Galectin-8 (Gal-8) is a tandem-repeat galectin with N- and C-terminal carbohydrate recognition domains (CRDs) that bind beta-galactoside-containing N-glycans. Both proteins co-localize in pulmonary and circulatory systems, suggesting a physiological interaction. Here, we demonstrate a glycan-dependent binding between Gal-8 and AAT using pull-down assays, mass spectrometry, isothermal titration calorimetry, and size-exclusion chromatography. Importantly, binding of Gal-8 impairs AAT's protease inhibitory activity, with the N-terminal CRD of Gal-8 sufficient to disrupt AAT function. Kinetic analyses show that Gal-8 inhibits AAT and enhances trypsin activity, as evidenced by a decrease in K(m) and an increase in catalytic efficiency (k(cat)/K(m)). In cell assays, Gal-8 restored trypsin-mediated proteolysis and induced cell detachment in HeLa and CHO cells despite AAT presence, confirming biological relevance. Leveraging this interaction, we developed a lactose-mediated elution method to purify AAT from human and bovine serum using Gal-8 immobilized on Ni-NTA beads. Moreover, a stable CHO cell line expressing recombinant AAT ( approximately 2 g/L) exhibited glycosylation comparable to serum AAT and retained Gal-8 binding. Our findings reveal Gal-8 as a novel modulator of AAT activity and present a glycan-specific strategy for AAT purification, with implications for biotherapeutic production and quality control.
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Authors: Su, J.Y.
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Galectin-8 binding to alpha-1 antitrypsin is a physiological mechanism in healthy individuals but exacerbates the symptoms of alpha-1 antitrypsin deficiency.,Sayed H, Mayo KH, Zhou Y, Tai G, Su J Arch Biochem Biophys. 2025 Oct;772:110577. doi: 10.1016/j.abb.2025.110577. Epub , 2025 Aug 6. PMID:40780418<ref>PMID:40780418</ref>
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Description: Crystal structure of Galectin-8 N-CRD with N-acetyllactosamine
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Su, J.Y]]
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<div class="pdbe-citations 9kh4" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Su JY]]

Current revision

Crystal structure of Galectin-8 N-CRD with N-acetyllactosamine

PDB ID 9kh4

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