9i08

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Current revision (07:35, 19 November 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9i08 is ON HOLD until 2027-01-14
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==The Paulinella chromatophore transit peptide part2 (crTPpart2) from ArgC==
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<StructureSection load='9i08' size='340' side='right'caption='[[9i08]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9i08]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Paulinella_chromatophora Paulinella chromatophora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9I08 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9I08 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9i08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9i08 OCA], [https://pdbe.org/9i08 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9i08 RCSB], [https://www.ebi.ac.uk/pdbsum/9i08 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9i08 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The chromatophores of the cercozoan amoeba Paulinella are photosynthetic organelles that evolved from a cyanobacterial endosymbiont. Many nucleus-encoded chromatophore-targeted proteins carry unusual N-terminal targeting signals termed crTPs, which are bipartite. crTPpart1 likely mediates trafficking through the secretory pathway and is cleaved off during import, but crTPpart2 remains attached to its cargo protein and its function is unknown. To unravel the functional role of crTPpart2, here we elucidated the structures of crTPpart2 from two different chromatophore-targeted proteins by X-ray crystallography at approximately 2.3 A resolution. Interestingly, the crTPpart2 of both proteins adopts a structural fold. Both structures share a conserved structured core and a flexible N-terminal arm. The structured core resembles proteins of the gamma-glutamyl cyclotransferase superfamily within which crTPpart2 structures form a protein (sub)-family. The proposed catalytic center typical for proteins with cyclotransferase activity is not conserved in crTPpart2. A Cys pair that is conserved in crTPpart2 of many chromatophore-targeted proteins has been captured as a disulfide bridge. Together, our data suggest that chromatophore-targeted proteins are imported in their folded state and that the fold adopted by crTPpart2 plays a functional role during import. The characterization of its structure and flexibility provides important steps toward elucidating this protein translocation mechanism.
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Authors: Klimenko, V., Reiners, J., Applegate, V., Reimann, K., Hoeppner, A., Smits, S.H.J., Nowack, E.C.M.
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The Paulinella chromatophore transit peptide part2 adopts a structural fold similar to the gamma-glutamyl-cyclotransferase fold.,Klimenko V, Reiners J, Applegate V, Reimann K, Popowicz G, Hoeppner A, Papadopoulos A, Smits SHJ, Nowack ECM Plant Physiol. 2025 Sep 30;199(2):kiaf504. doi: 10.1093/plphys/kiaf504. PMID:41071934<ref>PMID:41071934</ref>
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Description: The Paulinella chromatophore transit peptide part2 (crTPpart2) from ArgC
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Reiners, J]]
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<div class="pdbe-citations 9i08" style="background-color:#fffaf0;"></div>
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[[Category: Nowack, E.C.M]]
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== References ==
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[[Category: Klimenko, V]]
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<references/>
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[[Category: Hoeppner, A]]
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__TOC__
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[[Category: Applegate, V]]
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</StructureSection>
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[[Category: Smits, S.H.J]]
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[[Category: Large Structures]]
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[[Category: Reimann, K]]
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[[Category: Paulinella chromatophora]]
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[[Category: Applegate V]]
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[[Category: Hoeppner A]]
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[[Category: Klimenko V]]
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[[Category: Nowack ECM]]
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[[Category: Reimann K]]
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[[Category: Reiners J]]
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[[Category: Smits SHJ]]

Current revision

The Paulinella chromatophore transit peptide part2 (crTPpart2) from ArgC

PDB ID 9i08

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