User:Rupal Yadav; BI3323-Aug25.

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<table><tr><td colspan='2'>
<table><tr><td colspan='2'>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"> <scene name='10/1096908/Cl/1'>Cl Ion</scene>, <scene name='10/1096908/Fmn/1'>Flavin Mononucleotide cofactor</scene>, <scene name='10/1096855/Jf/1'>fluorogenic rhodamine dye (JF635-HTL)</scene>. </td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"> <scene name='10/1096908/Cl/2'>Cl Ion</scene> , <scene name='10/1096908/Gol/1'>Glycerol</scene>, <scene name='10/1096908/FMN/1'>Flavin Mononucleotide cofactor</scene>, <scene name='10/1096855/Jf/1'>fluorogenic rhodamine dye (JF635-HTL)</scene>. </td></tr>
</table>
</table>
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*Ligand: Binds to a <scene name='10/1096855/Jf/1'>fluorogenic rhodamine dye (JF635-HTL)</scene>.
*Ligand: Binds to a <scene name='10/1096855/Jf/1'>fluorogenic rhodamine dye (JF635-HTL)</scene>.
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:Light ON (450 nm): Light activates the sAsLOV2 domain using <scene name='10/1096908/Fmn/1'>Flavin Mononucleotide cofactor</scene>, causing a conformational change (Jα helix unfolding).
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:Light ON (450 nm): Light activates the sAsLOV2 domain using <scene name='10/1096908/Fmn/2'>Flavin Mononucleotide cofactor</scene>, causing a conformational change (Jα helix unfolding).
:Fluorescence ON: This change forces the bound dye into its fluorescent state.
:Fluorescence ON: This change forces the bound dye into its fluorescent state.
:Light OFF (Dark): The protein structure relaxes back to its original shape, shifting
:Light OFF (Dark): The protein structure relaxes back to its original shape, shifting
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Although irreversibly photoactivatable fluorophores are well established, reversible reporters that can be reactivated multiple times remain scarce, and only a few have been applied in living cells using generalizable protein labelling methods.
Although irreversibly photoactivatable fluorophores are well established, reversible reporters that can be reactivated multiple times remain scarce, and only a few have been applied in living cells using generalizable protein labelling methods.
This system improves techniques like SMLM by allowing precise control of single-molecule emitter density over time by achieving sub-diffraction resolution in living cells.
This system improves techniques like SMLM by allowing precise control of single-molecule emitter density over time by achieving sub-diffraction resolution in living cells.
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Also, it exploits high-quality synthetic dyes for bright colors and stability in light whose performance does not rely on oxygen and is less affected by pH changes compared to traditional fluorescent proteins (FPs).
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Also, it exploits high-quality synthetic dyes for bright colors and stability in light whose performance does not rely on oxygen and is less affected by pH changes compared to traditional fluorescent proteins (FPs).

Revision as of 14:40, 30 November 2025

A Photoswitchable HaloTag for Spatiotemporal Control of Fluorescence in Living Cells [1]

PDB ID: 9HKF X-Ray Crystal structure of psHaloTag labeled with JF635-HTL in the dark state

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