9sp7

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m (Protected "9sp7" [edit=sysop:move=sysop])
Current revision (08:23, 11 December 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9sp7 is ON HOLD
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==Human galactosyltransferase B3GalT6==
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<StructureSection load='9sp7' size='340' side='right'caption='[[9sp7]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9sp7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9SP7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9SP7 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9sp7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9sp7 OCA], [https://pdbe.org/9sp7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9sp7 RCSB], [https://www.ebi.ac.uk/pdbsum/9sp7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9sp7 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/B3GT6_HUMAN B3GT6_HUMAN]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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We selected the N,O-glycosylated proteoglycan bikunin as a model to establish a chemoenzymatic approach to defined proteoglycans using native chemical ligation. Overexpression of the human linkage region glycosyltransferases B4GalT7, B3GalT6 and B3GlcAT-1 as N-terminal SUMO-fusions gave high yields of soluble and active enzymes in E. coli. When starting with xylosylated bikunin peptides the transferases performed well in enzymatic cascade reactions and provided the desired linkage region tetrasaccharide glycopeptides. B3GalT6 and B3GlcAT-1 led to side products with N,O-glycosylated bikunin peptides revealing unexpected promiscuity of both enzymes towards complex type N-glycans. Additionally, B3GalT6 was found to synthesize short poly-beta3 Gal structures. B3GlcAT-1 can slowly convert the biosynthetic intermediate Gal-Xyl to the non-canonical trisaccharide GlcA-Gal-Xyl. This reaction independently confirmed the recently detected biosynthetic bypass to GAGs in the case of dysfunctional B3GalT6 (spondylodysplastic Ehlers-Danlos-syndrome). The three linkage region glycosyltransferases B4GalT7, B3GalT6 and B3GlcAT-1 were dimeric in solution and the crystal structure of B3GalT6 was solved showing a covalent dimer linked by a disulfide in the center of the large dimerization domain. This motif appears to be conserved in higher organisms and reinforces the concept of dimeric glycosyltransferases lining the Golgi.
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Authors: Weyand, M., Unverzagt, C.
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Human Proteoglycan Linkage Region Glycosyltransferases are Dimeric and Show Unexpected Specificities.,Weidler S, Bundgaard O, Hessefort M, Radisch M, Graf CGF, Lam K, Neubauer VJ, Eisenreich J, Kohler L, Moremen KW, Steentoft C, Clausen H, Huang TY, Hung SC, Steegborn C, Weyand M, Unverzagt C Angew Chem Int Ed Engl. 2025 Nov 29:e16855. doi: 10.1002/anie.202516855. PMID:41316887<ref>PMID:41316887</ref>
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Description: Human galactosyltransferase B3GalT6
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Unverzagt, C]]
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<div class="pdbe-citations 9sp7" style="background-color:#fffaf0;"></div>
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[[Category: Weyand, M]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Unverzagt C]]
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[[Category: Weyand M]]

Current revision

Human galactosyltransferase B3GalT6

PDB ID 9sp7

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