We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

9hm0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:56, 17 December 2025) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 9hm0 is ON HOLD until Paper Publication
+
==Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome==
 +
<StructureSection load='9hm0' size='340' side='right'caption='[[9hm0]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[9hm0]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_W303 Saccharomyces cerevisiae W303]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9HM0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9HM0 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9hm0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9hm0 OCA], [https://pdbe.org/9hm0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9hm0 RCSB], [https://www.ebi.ac.uk/pdbsum/9hm0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9hm0 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/COX24_YEAST COX24_YEAST] Involved in the splicing of the COX1 mRNA.<ref>PMID:16339141</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Mitochondrial gene expression is essential for oxidative phosphorylation. Mitochondrial-encoded mRNAs are translated by dedicated mitochondrial ribosomes (mitoribosomes), whose regulation remains elusive. In Saccharomyces cerevisiae, nuclear-encoded mitochondrial translational activators (TAs) facilitate transcript-specific translation by a yet unknown mechanism. Here, we investigated the function of TAs containing RNA-binding pentatricopeptide repeats using selective mitoribosome profiling and cryo-electron microscopy (cryo-EM) structural analysis. These analyses show that TAs exhibit strong selectivity for mitoribosomes initiating on their target transcripts. Moreover, TA-mitoribosome footprints indicate that TAs recruit mitoribosomes proximal to the start codon. Two cryo-EM structures of mRNA-TA complexes bound to mitoribosomes stalled in the post-initiation, pre-elongation state revealed the general mechanism of TA action. Specifically, the TAs bind to structural elements in the 5' untranslated region of the client mRNA and the mRNA channel exit to align the mRNA in the small subunit during initiation. Our findings provide a mechanistic basis for understanding how mitochondria achieve transcript-specific translation initiation without relying on general sequence elements to position mitoribosomes at start codons.
-
Authors: Carlstrom, A., Rovsnik, U., Ott, M.
+
Translational activators align mRNAs at the small mitoribosomal subunit for translation initiation.,Bridgers JB, Carlstrom A, Sherpa D, Couvillion MT, Rovsnik U, Gao J, Wan B, Shao S, Ott M, Churchman LS Nat Struct Mol Biol. 2025 Dec 3. doi: 10.1038/s41594-025-01726-y. PMID:41339860<ref>PMID:41339860</ref>
-
Description: Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Carlstrom, A]]
+
<div class="pdbe-citations 9hm0" style="background-color:#fffaf0;"></div>
-
[[Category: Rovsnik, U]]
+
== References ==
-
[[Category: Ott, M]]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Saccharomyces cerevisiae W303]]
 +
[[Category: Carlstrom A]]
 +
[[Category: Ott M]]
 +
[[Category: Rovsnik U]]

Current revision

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

PDB ID 9hm0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools