We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

9ms3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:37, 7 January 2026) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 9ms3 is ON HOLD until Paper Publication
+
==Crystal structure of Bmp7 in complex with 2,4-dibromophenol generated by substrate soaking==
-
 
+
<StructureSection load='9ms3' size='340' side='right'caption='[[9ms3]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
Authors:
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[9ms3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Marinomonas_mediterranea Marinomonas mediterranea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9MS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9MS3 FirstGlance]. <br>
-
Description:
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=Y8I:2,4-bis(bromanyl)phenol'>Y8I</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9ms3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9ms3 OCA], [https://pdbe.org/9ms3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9ms3 RCSB], [https://www.ebi.ac.uk/pdbsum/9ms3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9ms3 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BMP7_MARM1 BMP7_MARM1] Cytochrome P450 protein involved in the biosynthesis of polybrominated aromatic organic compounds (PubMed:25061970). In the presence of ferredoxin, ferredoxin reductase and NADH, catalyzes the coupling of bromophenols and bromopyrroles, forming various polybrominated biphenyls and hydroxylated polybrominated diphenyl ethers (OH-BDE) (By similarity). Can also mediate the heterocoupling of 3,5-dibromocatechol, forming six different compounds, including polybrominated dibenzo-p-dioxins, which are among the most toxic molecules known to man (PubMed:25061970).[UniProtKB:V4HJ73]<ref>PMID:25061970</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Marinomonas mediterranea]]
 +
[[Category: Nolan K]]
 +
[[Category: Wang Y]]

Current revision

Crystal structure of Bmp7 in complex with 2,4-dibromophenol generated by substrate soaking

PDB ID 9ms3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools