1z1d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1z1d.gif|left|200px]]
[[Image:1z1d.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1z1d |SIZE=350|CAPTION= <scene name='initialview01'>1z1d</scene>
+
The line below this paragraph, containing "STRUCTURE_1z1d", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND=
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= RPA2, REPA2, RPA32 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1z1d| PDB=1z1d | SCENE= }}
-
|RELATEDENTRY=[[1dpu|1DPU]], [[1tbd|1TBD]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1d OCA], [http://www.ebi.ac.uk/pdbsum/1z1d PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1z1d RCSB]</span>
+
-
}}
+
'''Structural Model for the interaction between RPA32 C-terminal domain and SV40 T antigen origin binding domain.'''
'''Structural Model for the interaction between RPA32 C-terminal domain and SV40 T antigen origin binding domain.'''
Line 33: Line 30:
[[Category: Mizoue, L.]]
[[Category: Mizoue, L.]]
[[Category: Ott, R D.]]
[[Category: Ott, R D.]]
-
[[Category: origin binding domain]]
+
[[Category: Origin binding domain]]
-
[[Category: protein-protein complex]]
+
[[Category: Protein-protein complex]]
-
[[Category: winged helix-turn-helix motif]]
+
[[Category: Winged helix-turn-helix motif]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 17:04:13 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:27:37 2008''
+

Revision as of 14:04, 3 May 2008

Template:STRUCTURE 1z1d

Structural Model for the interaction between RPA32 C-terminal domain and SV40 T antigen origin binding domain.


Overview

Simian virus 40 (SV40) provides a model system for the study of eukaryotic DNA replication, in which the viral protein, large T antigen (Tag), marshals human proteins to replicate the viral minichromosome. SV40 replication requires interaction of Tag with the host single-stranded DNA-binding protein, replication protein A (hRPA). The C-terminal domain of the hRPA32 subunit (RPA32C) facilitates initiation of replication, but whether it interacts with Tag is not known. Affinity chromatography and NMR revealed physical interaction between hRPA32C and the Tag origin DNA-binding domain, and a structural model of the complex was determined. Point mutations were then designed to reverse charges in the binding sites, resulting in substantially reduced binding affinity. Corresponding mutations introduced into intact hRPA impaired initiation of replication and primosome activity, implying that this interaction has a critical role in assembly and progression of the SV40 replisome.

About this Structure

1Z1D is a Protein complex structure of sequences from Homo sapiens and Simian virus 40. Full crystallographic information is available from OCA.

Reference

Insights into hRPA32 C-terminal domain--mediated assembly of the simian virus 40 replisome., Arunkumar AI, Klimovich V, Jiang X, Ott RD, Mizoue L, Fanning E, Chazin WJ, Nat Struct Mol Biol. 2005 Apr;12(4):332-9. Epub 2005 Mar 27. PMID:15793585 Page seeded by OCA on Sat May 3 17:04:13 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools