1z3f

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[[Image:1z3f.gif|left|200px]]
[[Image:1z3f.gif|left|200px]]
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{{Structure
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|PDB= 1z3f |SIZE=350|CAPTION= <scene name='initialview01'>1z3f</scene>, resolution 1.50&Aring;
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The line below this paragraph, containing "STRUCTURE_1z3f", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=EL:ELLIPTICINE'>EL</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|GENE=
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{{STRUCTURE_1z3f| PDB=1z3f | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z3f OCA], [http://www.ebi.ac.uk/pdbsum/1z3f PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1z3f RCSB]</span>
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'''Structure of ellipticine in complex with a 6-bp DNA'''
'''Structure of ellipticine in complex with a 6-bp DNA'''
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==About this Structure==
==About this Structure==
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1Z3F is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z3F OCA].
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z3F OCA].
==Reference==
==Reference==
The anticancer agent ellipticine unwinds DNA by intercalative binding in an orientation parallel to base pairs., Canals A, Purciolas M, Aymami J, Coll M, Acta Crystallogr D Biol Crystallogr. 2005 Jul;61(Pt 7):1009-12. Epub 2005, Jun 24. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15983425 15983425]
The anticancer agent ellipticine unwinds DNA by intercalative binding in an orientation parallel to base pairs., Canals A, Purciolas M, Aymami J, Coll M, Acta Crystallogr D Biol Crystallogr. 2005 Jul;61(Pt 7):1009-12. Epub 2005, Jun 24. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15983425 15983425]
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[[Category: Protein complex]]
 
[[Category: Aymami, J.]]
[[Category: Aymami, J.]]
[[Category: Canals, A.]]
[[Category: Canals, A.]]
[[Category: Coll, M.]]
[[Category: Coll, M.]]
[[Category: Purciolas, M.]]
[[Category: Purciolas, M.]]
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[[Category: anticancer]]
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[[Category: Anticancer]]
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[[Category: dna binding]]
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[[Category: Dna binding]]
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[[Category: drug design]]
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[[Category: Drug design]]
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[[Category: ellipticine]]
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[[Category: Ellipticine]]
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[[Category: intercalator]]
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[[Category: Intercalator]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 17:08:07 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:28:29 2008''
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Revision as of 14:08, 3 May 2008

Template:STRUCTURE 1z3f

Structure of ellipticine in complex with a 6-bp DNA


Overview

Ellipticine is a natural plant product that has been found to be a powerful anticancer drug. Although still unclear, its mechanism of action is considered to be mainly based on DNA intercalation and/or the inhibition of topoisomerase II. Many experimental data suggest an intercalation based on stacking interactions along the major base-pair axis, but alternative binding modes have been proposed, in particular for ellipticine derivatives. The 1.5 A resolution structure of ellipticine complexed to a 6 bp oligonucleotide unveils its mode of binding and enables a detailed analysis of the distorting effects of the drug on the DNA.

About this Structure

Full crystallographic information is available from OCA.

Reference

The anticancer agent ellipticine unwinds DNA by intercalative binding in an orientation parallel to base pairs., Canals A, Purciolas M, Aymami J, Coll M, Acta Crystallogr D Biol Crystallogr. 2005 Jul;61(Pt 7):1009-12. Epub 2005, Jun 24. PMID:15983425 Page seeded by OCA on Sat May 3 17:08:07 2008

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