2a0f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2a0f.gif|left|200px]]
[[Image:2a0f.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2a0f |SIZE=350|CAPTION= <scene name='initialview01'>2a0f</scene>, resolution 2.9&Aring;
+
The line below this paragraph, containing "STRUCTURE_2a0f", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=PCT:PHOSPHONOACETAMIDE'>PCT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Aspartate_carbamoyltransferase Aspartate carbamoyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.3.2 2.1.3.2] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE= pyrB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]), pyrI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2a0f| PDB=2a0f | SCENE= }}
-
|RELATEDENTRY=[[1d09|1D09]], [[8at1|8AT1]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a0f OCA], [http://www.ebi.ac.uk/pdbsum/2a0f PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2a0f RCSB]</span>
+
-
}}
+
'''Structure of D236A mutant E. coli Aspartate Transcarbamoylase in presence of Phosphonoacetamide at 2.90 A resolution'''
'''Structure of D236A mutant E. coli Aspartate Transcarbamoylase in presence of Phosphonoacetamide at 2.90 A resolution'''
Line 31: Line 28:
[[Category: Stieglitz, K A.]]
[[Category: Stieglitz, K A.]]
[[Category: Tsuruta, H.]]
[[Category: Tsuruta, H.]]
-
[[Category: allosteric regulation]]
+
[[Category: Allosteric regulation]]
-
[[Category: alternate conformation]]
+
[[Category: Alternate conformation]]
-
[[Category: catalytic cycle]]
+
[[Category: Catalytic cycle]]
-
[[Category: homotropic cooperativity]]
+
[[Category: Homotropic cooperativity]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 18:27:08 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:46:21 2008''
+

Revision as of 15:27, 3 May 2008

Template:STRUCTURE 2a0f

Structure of D236A mutant E. coli Aspartate Transcarbamoylase in presence of Phosphonoacetamide at 2.90 A resolution


Overview

Snapshots of the catalytic cycle of the allosteric enzyme aspartate transcarbamoylase have been obtained via X-ray crystallography. The enzyme in the high-activity high-affinity R state contains two catalytic chains in the asymmetric unit that are different. The active site in one chain is empty, while the active site in the other chain contains an analog of the first substrate to bind in the ordered mechanism of the reaction. Small angle X-ray scattering shows that once the enzyme is converted to the R state, by substrate binding, the enzyme remains in the R state until substrates are exhausted. Thus, this structure represents the active form of the enzyme trapped at two different stages in the catalytic cycle, before the substrates bind (or after the products are released), and after the first substrate binds. Opening and closing of the catalytic chain domains explains how the catalytic cycle occurs while the enzyme remains globally in the R-quaternary structure.

About this Structure

2A0F is a Protein complex structure of sequences from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Structure of the E.coli aspartate transcarbamoylase trapped in the middle of the catalytic cycle., Stieglitz KA, Dusinberre KJ, Cardia JP, Tsuruta H, Kantrowitz ER, J Mol Biol. 2005 Sep 16;352(2):478-86. PMID:16120448 Page seeded by OCA on Sat May 3 18:27:08 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools