2b04

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[[Image:2b04.gif|left|200px]]
[[Image:2b04.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 2b04 |SIZE=350|CAPTION= <scene name='initialview01'>2b04</scene>, resolution 2.50&Aring;
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The line below this paragraph, containing "STRUCTURE_2b04", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CHO:GLYCOCHENODEOXYCHOLIC+ACID'>CHO</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= PLA2G1B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9823 Sus scrofa])
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-->
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|DOMAIN=
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{{STRUCTURE_2b04| PDB=2b04 | SCENE= }}
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|RELATEDENTRY=[[2azy|2AZY]], [[2azz|2AZZ]], [[2b00|2B00]], [[2b01|2B01]], [[2b03|2B03]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2b04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b04 OCA], [http://www.ebi.ac.uk/pdbsum/2b04 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2b04 RCSB]</span>
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}}
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'''Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Glycochenodeoxycholate'''
'''Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Glycochenodeoxycholate'''
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==Reference==
==Reference==
Structural basis for bile salt inhibition of pancreatic phospholipase A2., Pan YH, Bahnson BJ, J Mol Biol. 2007 Jun 1;369(2):439-50. Epub 2007 Mar 20. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17434532 17434532]
Structural basis for bile salt inhibition of pancreatic phospholipase A2., Pan YH, Bahnson BJ, J Mol Biol. 2007 Jun 1;369(2):439-50. Epub 2007 Mar 20. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17434532 17434532]
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[[Category: Phospholipase A(2)]]
 
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
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[[Category: Jain, M K.]]
[[Category: Jain, M K.]]
[[Category: Pan, Y H.]]
[[Category: Pan, Y H.]]
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[[Category: bile salt]]
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[[Category: Bile salt]]
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[[Category: binding]]
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[[Category: Binding]]
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[[Category: carboxylic ester hydrolase]]
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[[Category: Carboxylic ester hydrolase]]
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[[Category: glycochenodeoxycholate]]
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[[Category: Glycochenodeoxycholate]]
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[[Category: pancreatic enzyme]]
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[[Category: Pancreatic enzyme]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 19:41:15 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:59:40 2008''
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Revision as of 16:41, 3 May 2008

Template:STRUCTURE 2b04

Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Glycochenodeoxycholate


Overview

Bile salt interactions with phospholipid monolayers of fat emulsions are known to regulate the actions of gastrointestinal lipolytic enzymes in order to control the uptake of dietary fat. Specifically, on the lipid/aqueous interface of fat emulsions, the anionic portions of amphipathic bile salts have been thought to interact with and activate the enzyme group-IB phospholipase A2 (PLA2) derived from the pancreas. To explore this regulatory process, we have determined the crystal structures of the complexes of pancreatic PLA2 with the naturally occurring bile salts: cholate, glycocholate, taurocholate, glycochenodeoxycholate, and taurochenodeoxycholate. The five PLA2-bile salt complexes each result in a partly occluded active site, and the resulting ligand binding displays specific hydrogen bonding interactions and extensive hydrophobic packing. The amphipathic bile salts are bound to PLA2 with their polar hydroxyl and sulfate/carboxy groups oriented away from the enzyme's hydrophobic core. The impaired catalytic and interface binding functions implied by these structures provide a basis for the previous numerous observations of a biphasic dependence of the rate of PLA2 catalyzed hydrolysis of zwitterionic glycerophospholipids in the presence of bile salts. The rising or activation phase is consistent with enhanced binding and activation of the bound PLA2 by the bile salt induced anionic charge in a zwitterionic interface. The falling or inhibitory phase can be explained by the formation of a catalytically inert stoichiometric complex between PLA2 and any bile salts in which it forms a stable complex. The model provides new insight into the regulatory role that specific PLA2-bile salt interactions are likely to play in fat metabolism.

About this Structure

2B04 is a Single protein structure of sequence from Sus scrofa. Full crystallographic information is available from OCA.

Reference

Structural basis for bile salt inhibition of pancreatic phospholipase A2., Pan YH, Bahnson BJ, J Mol Biol. 2007 Jun 1;369(2):439-50. Epub 2007 Mar 20. PMID:17434532 Page seeded by OCA on Sat May 3 19:41:15 2008

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