2b7y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2b7y.gif|left|200px]]
[[Image:2b7y.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2b7y |SIZE=350|CAPTION= <scene name='initialview01'>2b7y</scene>, resolution 3.00&Aring;
+
The line below this paragraph, containing "STRUCTURE_2b7y", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:GLUCOSE'>GLC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2b7y| PDB=2b7y | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2b7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b7y OCA], [http://www.ebi.ac.uk/pdbsum/2b7y PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2b7y RCSB]</span>
+
-
}}
+
'''Fava Bean Lectin-Glucose Complex'''
'''Fava Bean Lectin-Glucose Complex'''
Line 27: Line 24:
[[Category: Becker, J W.]]
[[Category: Becker, J W.]]
[[Category: Jr., G N.Reeke.]]
[[Category: Jr., G N.Reeke.]]
-
[[Category: carbohydrate binding protein]]
+
[[Category: Carbohydrate binding protein]]
-
[[Category: d-glucose]]
+
[[Category: D-glucose]]
-
[[Category: glycoprotein]]
+
[[Category: Glycoprotein]]
-
[[Category: lectin-glucose complex]]
+
[[Category: Lectin-glucose complex]]
-
[[Category: plant lectin]]
+
[[Category: Plant lectin]]
-
[[Category: protein-carbohydrate complex]]
+
[[Category: Protein-carbohydrate complex]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 19:58:03 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:02:41 2008''
+

Revision as of 16:58, 3 May 2008

Template:STRUCTURE 2b7y

Fava Bean Lectin-Glucose Complex


Overview

The three-dimensional structure of favin, the glucose- and mannose-binding lectin of Vicia faba (vetch, broad bean), has been determined at a resolution of 2.8 angstroms by molecular replacement. The crystals contain specifically bound glucose and provide the first high-resolution view of specific saccharide binding in a leguminous lectin. The structure is similar to those of concanavalin A (Con A) and green pea lectin; differences from Con A show that minimal changes are needed to accommodate the cyclic permutation in amino acid sequence between the two molecules. The molecule is an ellipsoidal dimer dominated by extensive beta structures. Each protomer contains binding sites for two divalent metal ions (Mn2+ and Ca2+) and a specific saccharide. Glucose is bound by favin in a cleft in the molecular surface and has noncovalent contacts primarily with two peptide loops, one of which contains several metal ion ligands. The specific carbohydrate-binding site is similar to that of Con A in location and general peptide folding, despite several differences in specific amino acid residues.

About this Structure

2B7Y is a Protein complex structure of sequences from Vicia faba. Full crystallographic information is available from OCA.

Reference

Three-dimensional structure of favin: saccharide binding-cyclic permutation in leguminous lectins., Reeke GN Jr, Becker JW, Science. 1986 Nov 28;234(4780):1108-11. PMID:3775378 Page seeded by OCA on Sat May 3 19:58:03 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools