2b96

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[[Image:2b96.gif|left|200px]]
[[Image:2b96.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 2b96 |SIZE=350|CAPTION= <scene name='initialview01'>2b96</scene>, resolution 1.70&Aring;
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The line below this paragraph, containing "STRUCTURE_2b96", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=ANN:4-METHOXYBENZOIC+ACID'>ANN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= PLA2G1B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 Bos taurus])
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-->
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|DOMAIN=
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{{STRUCTURE_2b96| PDB=2b96 | SCENE= }}
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|RELATEDENTRY=[[1une|1UNE]], [[1mkt|1MKT]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2b96 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b96 OCA], [http://www.ebi.ac.uk/pdbsum/2b96 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2b96 RCSB]</span>
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}}
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'''Third Calcium ion found in an inhibitor bound phospholipase A2'''
'''Third Calcium ion found in an inhibitor bound phospholipase A2'''
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Third calcium ion found in an inhibitor-bound phospholipase A2., Sekar K, Gayathri D, Velmurugan D, Jeyakanthan J, Yamane T, Poi MJ, Tsai MD, Acta Crystallogr D Biol Crystallogr. 2006 Apr;62(Pt 4):392-7. Epub 2006, Mar 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16552140 16552140]
Third calcium ion found in an inhibitor-bound phospholipase A2., Sekar K, Gayathri D, Velmurugan D, Jeyakanthan J, Yamane T, Poi MJ, Tsai MD, Acta Crystallogr D Biol Crystallogr. 2006 Apr;62(Pt 4):392-7. Epub 2006, Mar 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16552140 16552140]
[[Category: Bos taurus]]
[[Category: Bos taurus]]
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[[Category: Phospholipase A(2)]]
 
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Sekar, K.]]
[[Category: Sekar, K.]]
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[[Category: Velmurugan, D.]]
[[Category: Velmurugan, D.]]
[[Category: Yamane, T.]]
[[Category: Yamane, T.]]
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[[Category: alpha helix]]
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[[Category: Alpha helix]]
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[[Category: anisic acid]]
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[[Category: Anisic acid]]
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[[Category: beta sheet]]
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[[Category: Beta sheet]]
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[[Category: triple mutant]]
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[[Category: Triple mutant]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 20:00:20 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:03:07 2008''
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Revision as of 17:00, 3 May 2008

Template:STRUCTURE 2b96

Third Calcium ion found in an inhibitor bound phospholipase A2


Overview

The lipolytic enzyme phospholipase A2 plays a crucial role in lipid metabolism and catalyzes hydrolysis of the fatty-acid ester bond at the sn-2 position of phospholipids. Here, the crystal structure (1.7 A resolution) of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2 complexed with an organic molecule, p-methoxybenzoic acid (anisic acid), is reported. Residues 60-70 (the surface-loop residues) are ordered and adopt conformations which are different from those normally found in structures in which a second calcium ion is present. It is interesting to note that for the first time a third calcium ion has been identified. In addition, four Tris (2-amino-2-hydroxymethyl-1,3-propanediol) molecules were located. It is believed that one of the Tris molecules plays a role in clamping the third calcium ion and that another is involved in controlling the dynamics of the surface loop through hydrogen bonds.

About this Structure

2B96 is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Reference

Third calcium ion found in an inhibitor-bound phospholipase A2., Sekar K, Gayathri D, Velmurugan D, Jeyakanthan J, Yamane T, Poi MJ, Tsai MD, Acta Crystallogr D Biol Crystallogr. 2006 Apr;62(Pt 4):392-7. Epub 2006, Mar 18. PMID:16552140 Page seeded by OCA on Sat May 3 20:00:20 2008

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