2bvg

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[[Image:2bvg.gif|left|200px]]
[[Image:2bvg.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 2bvg |SIZE=350|CAPTION= <scene name='initialview01'>2bvg</scene>, resolution 3.18&Aring;
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The line below this paragraph, containing "STRUCTURE_2bvg", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Fad+Binding+Site+For+Chain+D'>AC1</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/(R)-6-hydroxynicotine_oxidase (R)-6-hydroxynicotine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.3.6 1.5.3.6] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_2bvg| PDB=2bvg | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bvg OCA], [http://www.ebi.ac.uk/pdbsum/2bvg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2bvg RCSB]</span>
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}}
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'''CRYSTAL STRUCTURE OF 6-HYDOXY-D-NICOTINE OXIDASE FROM ARTHROBACTER NICOTINOVORANS. CRYSTAL FORM 1 (P21)'''
'''CRYSTAL STRUCTURE OF 6-HYDOXY-D-NICOTINE OXIDASE FROM ARTHROBACTER NICOTINOVORANS. CRYSTAL FORM 1 (P21)'''
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==Reference==
==Reference==
Crystal structure of 6-hydroxy-D-nicotine oxidase from Arthrobacter nicotinovorans., Koetter JW, Schulz GE, J Mol Biol. 2005 Sep 16;352(2):418-28. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16095622 16095622]
Crystal structure of 6-hydroxy-D-nicotine oxidase from Arthrobacter nicotinovorans., Koetter JW, Schulz GE, J Mol Biol. 2005 Sep 16;352(2):418-28. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16095622 16095622]
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[[Category: (R)-6-hydroxynicotine oxidase]]
 
[[Category: Arthrobacter nicotinovorans]]
[[Category: Arthrobacter nicotinovorans]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Koetter, J W.A.]]
[[Category: Koetter, J W.A.]]
[[Category: Schulz, G E.]]
[[Category: Schulz, G E.]]
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[[Category: autoflavinylation]]
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[[Category: Autoflavinylation]]
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[[Category: enantiomeric substrate]]
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[[Category: Enantiomeric substrate]]
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[[Category: flavoenzyme]]
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[[Category: Flavoenzyme]]
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[[Category: nicotine degradation]]
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[[Category: Nicotine degradation]]
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[[Category: oxidase]]
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[[Category: Oxidase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 20:51:29 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:12:19 2008''
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Revision as of 17:51, 3 May 2008

Template:STRUCTURE 2bvg

CRYSTAL STRUCTURE OF 6-HYDOXY-D-NICOTINE OXIDASE FROM ARTHROBACTER NICOTINOVORANS. CRYSTAL FORM 1 (P21)


Overview

The crystal structure of 6-hydroxy-d-nicotine oxidase (EC 1.5.3.6) was solved by X-ray diffraction analysis in three crystal forms at resolutions up to 1.9 A. The enzyme is monomeric in solution and also in the mother liquor but formed disulfide-dimers in all crystals. It belongs to the p-cresol methylhydroxylase-vanillyl-alcohol oxidase family and contains an FAD covalently bound to the polypeptide. The covalent bond of this enzyme was the first for which a purely autocatalytic formation had been shown. In contrast to previous reports, the bond does not involve N(epsilon2) (N3) of His72 but the N(delta1) (N1) atom. The geometry of this reaction is proposed and the autoflavinylation is discussed in the light of homologous structures. The enzyme is specific for 6-hydroxy-D-nicotine and is inhibited by the L-enantiomer. This observation was verified by modeling enzyme-substrate and enzyme-inhibitor complexes, which also showed the geometry of the catalyzed reaction. The binding models indicated that the deprotonation of the substrate rather than the hydride transfer is the specificity-determining step. The functionally closely related 6-hydroxy-L-nicotine oxidase processing the L-enantiomer is sequence-related to the greater glutathione reductase family with quite a different chainfold. A model of this "sister enzyme" derived from known homologous structures suggests that the reported L-substrate specificity and D-enantiomer inhibition are also determined by the location of the deprotonating base.

About this Structure

2BVG is a Single protein structure of sequence from Arthrobacter nicotinovorans. Full crystallographic information is available from OCA.

Reference

Crystal structure of 6-hydroxy-D-nicotine oxidase from Arthrobacter nicotinovorans., Koetter JW, Schulz GE, J Mol Biol. 2005 Sep 16;352(2):418-28. PMID:16095622 Page seeded by OCA on Sat May 3 20:51:29 2008

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