2cm5

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[[Image:2cm5.jpg|left|200px]]
[[Image:2cm5.jpg|left|200px]]
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{{Structure
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|PDB= 2cm5 |SIZE=350|CAPTION= <scene name='initialview01'>2cm5</scene>, resolution 1.28&Aring;
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The line below this paragraph, containing "STRUCTURE_2cm5", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Chain+A'>AC1</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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|ACTIVITY=
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|DOMAIN=
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{{STRUCTURE_2cm5| PDB=2cm5 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cm5 OCA], [http://www.ebi.ac.uk/pdbsum/2cm5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2cm5 RCSB]</span>
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}}
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'''CRYSTAL STRUCTURE OF THE C2B DOMAIN OF RABPHILIN'''
'''CRYSTAL STRUCTURE OF THE C2B DOMAIN OF RABPHILIN'''
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[[Category: Schlicker, C.]]
[[Category: Schlicker, C.]]
[[Category: Sheldrick, G M.]]
[[Category: Sheldrick, G M.]]
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[[Category: c2 domain]]
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[[Category: C2 domain]]
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[[Category: c2a-c2b linker fragment]]
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[[Category: C2a-c2b linker fragment]]
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[[Category: c2b]]
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[[Category: C2b]]
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[[Category: ca2+ binding]]
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[[Category: Ca2+ binding]]
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[[Category: metal-binding]]
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[[Category: Metal-binding]]
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[[Category: protein transport]]
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[[Category: Protein transport]]
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[[Category: rabphilin3a]]
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[[Category: Rabphilin3a]]
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[[Category: synapse]]
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[[Category: Synapse]]
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[[Category: synaptic exocytosis]]
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[[Category: Synaptic exocytosis]]
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[[Category: transport]]
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[[Category: Transport]]
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[[Category: zinc]]
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[[Category: Zinc]]
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[[Category: zinc-finger]]
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[[Category: Zinc-finger]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 22:28:47 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:23:28 2008''
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Revision as of 19:28, 3 May 2008

Template:STRUCTURE 2cm5

CRYSTAL STRUCTURE OF THE C2B DOMAIN OF RABPHILIN


Overview

The Ca(2+) binding properties of C2 domains are essential for the function of their host proteins. We present here the first crystal structures showing an unexpected Ca(2+) binding mode of the C2B domain of rabphilin-3A in atomic detail. Acidic residues from the linker region between the C2A and C2B domains of rabphilin-3A interact with the Ca(2+)-binding region of the C2B domain. Because of these interactions, the coordination sphere of the two bound Ca(2+) ions is almost complete. Mutation of these acidic residues to alanine resulted in a 10-fold decrease in the intrinsic Ca(2+) binding affinity of the C2B domain. Using NMR spectroscopy, we show that this interaction occurred only in the Ca(2+)-bound state of the C2B domain. In addition, this Ca(2+) binding mode was maintained in the C2 domain tandem fragment. In NMR-based liposome binding assays, the linker was not released upon phospholipid binding. Therefore, this unprecedented Ca(2+) binding mode not only shows how a C2 domain increases its intrinsic Ca(2+) affinity, but also provides the structural base for an atypical protein-Ca(2+)-phospholipid binding mode of rabphilin-3A.

About this Structure

2CM5 is a Single protein structure of sequence from Rattus norvegicus. Full crystallographic information is available from OCA.

Reference

The C2A-C2B linker defines the high affinity Ca(2+) binding mode of rabphilin-3A., Montaville P, Schlicker C, Leonov A, Zweckstetter M, Sheldrick GM, Becker S, J Biol Chem. 2007 Feb 16;282(7):5015-25. Epub 2006 Dec 13. PMID:17166855 Page seeded by OCA on Sat May 3 22:28:47 2008

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