2crx

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[[Image:2crx.gif|left|200px]]
[[Image:2crx.gif|left|200px]]
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{{Structure
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|PDB= 2crx |SIZE=350|CAPTION= <scene name='initialview01'>2crx</scene>, resolution 2.5&Aring;
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The line below this paragraph, containing "STRUCTURE_2crx", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=CIA:Recombinase+Active+Site'>CIA</scene> and <scene name='pdbsite=CIB:Recombinase+Active+Site'>CIB</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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|GENE=
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|DOMAIN=
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{{STRUCTURE_2crx| PDB=2crx | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2crx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2crx OCA], [http://www.ebi.ac.uk/pdbsum/2crx PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2crx RCSB]</span>
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}}
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'''STRUCTURE OF THE HOLLIDAY JUNCTION INTERMEDIATE IN CRE-LOXP SITE-SPECIFIC RECOMBINATION'''
'''STRUCTURE OF THE HOLLIDAY JUNCTION INTERMEDIATE IN CRE-LOXP SITE-SPECIFIC RECOMBINATION'''
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[[Category: Guo, F.]]
[[Category: Guo, F.]]
[[Category: Vanduyne, G D.]]
[[Category: Vanduyne, G D.]]
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[[Category: cre recombinase]]
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[[Category: Cre recombinase]]
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[[Category: holliday junction]]
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[[Category: Holliday junction]]
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[[Category: recombinase/dna complex]]
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[[Category: Recombinase/dna complex]]
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[[Category: recombination]]
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[[Category: Recombination]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 22:54:52 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:25:38 2008''
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Revision as of 19:54, 3 May 2008

Template:STRUCTURE 2crx

STRUCTURE OF THE HOLLIDAY JUNCTION INTERMEDIATE IN CRE-LOXP SITE-SPECIFIC RECOMBINATION


Overview

We have determined the X-ray crystal structures of two DNA Holliday junctions (HJs) bound by Cre recombinase. The HJ is a four-way branched structure that occurs as an intermediate in genetic recombination pathways, including site-specific recombination by the lambda-integrase family. Cre recombinase is an integrase family member that recombines 34 bp loxP sites in the absence of accessory proteins or auxiliary DNA sequences. The 2.7 A structure of Cre recombinase bound to an immobile HJ and the 2.5 A structure of Cre recombinase bound to a symmetric, nicked HJ reveal a nearly planar, twofold-symmetric DNA intermediate that shares features with both the stacked-X and the square conformations of the HJ that exist in the unbound state. The structures support a protein-mediated crossover isomerization of the junction that acts as the switch responsible for activation and deactivation of recombinase active sites. In this model, a subtle isomerization of the Cre recombinase-HJ quaternary structure dictates which strands are cleaved during resolution of the junction via a mechanism that involves neither branch migration nor helical restacking.

About this Structure

2CRX is a Single protein structure of sequence from Enterobacteria phage p1. Full crystallographic information is available from OCA.

Reference

Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination., Gopaul DN, Guo F, Van Duyne GD, EMBO J. 1998 Jul 15;17(14):4175-87. PMID:9670032 Page seeded by OCA on Sat May 3 22:54:52 2008

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