2d6b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2d6b.gif|left|200px]]
[[Image:2d6b.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2d6b |SIZE=350|CAPTION= <scene name='initialview01'>2d6b</scene>, resolution 1.25&Aring;
+
The line below this paragraph, containing "STRUCTURE_2d6b", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=202:BROMIC+ACID'>202</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2d6b| PDB=2d6b | SCENE= }}
-
|RELATEDENTRY=[[1hc0|1HC0]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d6b OCA], [http://www.ebi.ac.uk/pdbsum/2d6b PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2d6b RCSB]</span>
+
-
}}
+
'''Novel Bromate Species trapped within a Protein Crystal'''
'''Novel Bromate Species trapped within a Protein Crystal'''
Line 28: Line 25:
[[Category: Mesters, J R.]]
[[Category: Mesters, J R.]]
[[Category: Ondracek, J.]]
[[Category: Ondracek, J.]]
-
[[Category: bromate]]
+
[[Category: Bromate]]
-
[[Category: lysozyme]]
+
[[Category: Lysozyme]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 23:46:46 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:30:48 2008''
+

Revision as of 20:46, 3 May 2008

Image:2d6b.gif

Template:STRUCTURE 2d6b

Novel Bromate Species trapped within a Protein Crystal


Overview

Only a few protein-oxoanion crystal complexes have been described to date. Here, the structure of a protein soaked in a bromate solution has been determined to a resolution of 1.25 A and refined to final overall R/R(free) values of 18.04/21.3 (isotropic) and 11.25/14.67 (anisotropic). In contrast to the single-model approach, refinement of an ensemble of ten models enabled us to determine variances and statistically evaluate bond-length distances and angles in the oxoanions. In total, nine bromate positions, including two BrO(3)(-) x HBrO(3) dimer species, have been identified on the basis of the anomalous signal of the Br atoms. For all bromate ions, the main-chain amide atoms of the protein were identified as the dominant binding positions, a useful property in any experimental phase-determination experiment.

About this Structure

2D6B is a Single protein structure of sequence from Gallus gallus. Full crystallographic information is available from OCA.

Reference

An ensemble of crystallographic models enables the description of novel bromate-oxoanion species trapped within a protein crystal., Ondracek J, Mesters JR, Acta Crystallogr D Biol Crystallogr. 2006 Sep;62(Pt 9):996-1001. Epub 2006, Aug 19. PMID:16929100 Page seeded by OCA on Sat May 3 23:46:46 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2d6b"
Personal tools