This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2dyp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2dyp.gif|left|200px]]
[[Image:2dyp.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2dyp |SIZE=350|CAPTION= <scene name='initialview01'>2dyp</scene>, resolution 2.5&Aring;
+
The line below this paragraph, containing "STRUCTURE_2dyp", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND=
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2dyp| PDB=2dyp | SCENE= }}
-
|RELATEDENTRY=[[1ypd|1YPD]], [[2d31|2D31]], [[2gw5|2GW5]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dyp OCA], [http://www.ebi.ac.uk/pdbsum/2dyp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2dyp RCSB]</span>
+
-
}}
+
'''Crystal Structure of LILRB2(LIR2/ILT4/CD85d) complexed with HLA-G'''
'''Crystal Structure of LILRB2(LIR2/ILT4/CD85d) complexed with HLA-G'''
Line 30: Line 27:
[[Category: Rasubala, L.]]
[[Category: Rasubala, L.]]
[[Category: Shiroishi, M.]]
[[Category: Shiroishi, M.]]
-
[[Category: immunoglobulin-like]]
+
[[Category: Immunoglobulin-like]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 01:37:53 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:41:33 2008''
+

Revision as of 22:37, 3 May 2008

Template:STRUCTURE 2dyp

Crystal Structure of LILRB2(LIR2/ILT4/CD85d) complexed with HLA-G


Overview

HLA-G is a nonclassical MHC class I (MHCI) molecule that can suppress a wide range of immune responses in the maternal-fetal interface. The human inhibitory immune receptors leukocyte Ig-like receptor (LILR) B1 [also called LIR1, Ig-like transcript 2 (ILT2), or CD85j] and LILRB2 (LIR2/ILT4/CD85d) preferentially recognize HLA-G. HLA-G inherently exhibits various forms, including beta(2)-microglobulin (beta(2)m)-free and disulfide-linked dimer forms. Notably, LILRB1 cannot recognize the beta(2)m-free form of HLA-G or HLA-B27, but LILRB2 can recognize the beta(2)m-free form of HLA-B27. To date, the structural basis for HLA-G/LILR recognition remains to be examined. Here, we report the 2.5-A resolution crystal structure of the LILRB2/HLA-G complex. LILRB2 exhibits an overlapping but distinct MHCI recognition mode compared with LILRB1 and dominantly recognizes the hydrophobic site of the HLA-G alpha3 domain. NMR binding studies also confirmed these LILR recognition differences on both conformed (heavy chain/peptide/beta(2)m) and free forms of beta(2)m. Binding studies using beta(2)m-free MHCIs revealed differential beta(2)m-dependent LILR-binding specificities. These results suggest that subtle structural differences between LILRB family members cause the distinct binding specificities to various forms of HLA-G and other MHCIs, which may in turn regulate immune suppression.

About this Structure

2DYP is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Structural basis for recognition of the nonclassical MHC molecule HLA-G by the leukocyte Ig-like receptor B2 (LILRB2/LIR2/ILT4/CD85d)., Shiroishi M, Kuroki K, Rasubala L, Tsumoto K, Kumagai I, Kurimoto E, Kato K, Kohda D, Maenaka K, Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16412-7. Epub 2006 Oct 20. PMID:17056715 Page seeded by OCA on Sun May 4 01:37:53 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools