This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2f3k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2f3k.jpg|left|200px]]
[[Image:2f3k.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2f3k |SIZE=350|CAPTION= <scene name='initialview01'>2f3k</scene>, resolution 1.599&Aring;
+
The line below this paragraph, containing "STRUCTURE_2f3k", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RO1:(3S,4AS,8AS)-N-(TERT-BUTYL)-2-[(3S)-3-({3-(METHYLSULFONYL)-N-[(PYRIDIN-3-YLOXY)ACETYL]-L-VALYL}AMINO)-2-OXO-4-PHENYLBUTYL]DECAHYDROISOQUINOLINE-3-CARBOXAMIDE'>RO1</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/HIV-1_retropepsin HIV-1 retropepsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.16 3.4.23.16] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2f3k| PDB=2f3k | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2f3k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f3k OCA], [http://www.ebi.ac.uk/pdbsum/2f3k PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2f3k RCSB]</span>
+
-
}}
+
'''Substrate envelope and drug resistance: crystal structure of r01 in complex with wild-type hiv-1 protease'''
'''Substrate envelope and drug resistance: crystal structure of r01 in complex with wild-type hiv-1 protease'''
Line 32: Line 29:
[[Category: Prabu-Jeyabalan, M.]]
[[Category: Prabu-Jeyabalan, M.]]
[[Category: Schiffer, C A.]]
[[Category: Schiffer, C A.]]
-
[[Category: drug resistance]]
+
[[Category: Drug resistance]]
-
[[Category: hiv protease]]
+
[[Category: Hiv protease]]
-
[[Category: ro1]]
+
[[Category: Ro1]]
-
[[Category: substrate envelope]]
+
[[Category: Substrate envelope]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 03:25:25 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:57:27 2008''
+

Revision as of 00:25, 4 May 2008

Template:STRUCTURE 2f3k

Substrate envelope and drug resistance: crystal structure of r01 in complex with wild-type hiv-1 protease


Overview

In our previous crystallographic studies of human immunodeficiency virus type 1 (HIV-1) protease-substrate complexes, we described a conserved "envelope" that appears to be important for substrate recognition and the selection of drug-resistant mutations. In this study, the complex of HIV-1 protease with the inhibitor RO1 was determined and comparison with the substrate envelope provides a rationale for mutational patterns.

About this Structure

2F3K is a Single protein structure of sequence from Human immunodeficiency virus 1. Full crystallographic information is available from OCA.

Reference

Substrate envelope and drug resistance: crystal structure of RO1 in complex with wild-type human immunodeficiency virus type 1 protease., Prabu-Jeyabalan M, King NM, Nalivaika EA, Heilek-Snyder G, Cammack N, Schiffer CA, Antimicrob Agents Chemother. 2006 Apr;50(4):1518-21. PMID:16569872 Page seeded by OCA on Sun May 4 03:25:25 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools