2gbl

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[[Image:2gbl.gif|left|200px]]
[[Image:2gbl.gif|left|200px]]
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{{Structure
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|PDB= 2gbl |SIZE=350|CAPTION= <scene name='initialview01'>2gbl</scene>, resolution 2.8&Aring;
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The line below this paragraph, containing "STRUCTURE_2gbl", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5&#39;-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>, <scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= kaiC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1131 Synechococcus sp.])
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|DOMAIN=
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{{STRUCTURE_2gbl| PDB=2gbl | SCENE= }}
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|RELATEDENTRY=[[1u9i|1U9I]], [[1tf7|1TF7]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gbl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gbl OCA], [http://www.ebi.ac.uk/pdbsum/2gbl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gbl RCSB]</span>
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}}
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'''Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites'''
'''Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites'''
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[[Category: Williams, D R.]]
[[Category: Williams, D R.]]
[[Category: Xu, Y.]]
[[Category: Xu, Y.]]
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[[Category: circadian]]
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[[Category: Circadian]]
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[[Category: circadian clock protein homohexamer]]
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[[Category: Circadian clock protein homohexamer]]
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[[Category: hexamer,]]
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[[Category: Hexamer]]
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[[Category: kaia]]
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[[Category: Kaia]]
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[[Category: kaib]]
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[[Category: Kaib]]
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[[Category: kaic]]
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[[Category: Kaic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:55:08 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:14:26 2008''
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Revision as of 01:55, 4 May 2008

Template:STRUCTURE 2gbl

Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites


Overview

The cyanobacterial circadian clock can be reconstituted in vitro by mixing recombinant KaiA, KaiB and KaiC proteins with ATP, producing KaiC phosphorylation and dephosphorylation cycles that have a regular rhythm with a ca. 24-h period and are temperature-compensated. KaiA and KaiB are modulators of KaiC phosphorylation, whereby KaiB antagonizes KaiA's action. Here, we present a complete crystallographic model of the Synechococcus elongatus KaiC hexamer that includes previously unresolved portions of the C-terminal regions, and a negative-stain electron microscopy study of S. elongatus and Thermosynechococcus elongatus BP-1 KaiA-KaiC complexes. Site-directed mutagenesis in combination with EM reveals that KaiA binds exclusively to the CII half of the KaiC hexamer. The EM-based model of the KaiA-KaiC complex reveals protein-protein interactions at two sites: the known interaction of the flexible C-terminal KaiC peptide with KaiA, and a second postulated interaction between the apical region of KaiA and the ATP binding cleft on KaiC. This model brings KaiA mutation sites that alter clock period or abolish rhythmicity into contact with KaiC and suggests how KaiA might regulate KaiC phosphorylation.

About this Structure

2GBL is a Protein complex structure of sequences from Synechococcus sp.. Full crystallographic information is available from OCA.

Reference

Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods., Pattanayek R, Williams DR, Pattanayek S, Xu Y, Mori T, Johnson CH, Stewart PL, Egli M, EMBO J. 2006 May 3;25(9):2017-28. Epub 2006 Apr 20. PMID:16628225 Page seeded by OCA on Sun May 4 04:55:08 2008

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