2gv6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2gv6.gif|left|200px]]
[[Image:2gv6.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2gv6 |SIZE=350|CAPTION= <scene name='initialview01'>2gv6</scene>, resolution 2.1&Aring;
+
The line below this paragraph, containing "STRUCTURE_2gv6", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=730:(S)-3-(3-(4-(2-GUANIDINOETHYL)PIPERIDIN-1-YL)-2-(NAPHTHALENE-2-SULFONAMIDO)-3-OXOPROPYL)BENZIMIDAMIDE'>730</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= ST14 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2gv6| PDB=2gv6 | SCENE= }}
-
|RELATEDENTRY=[[2gv7|2GV7]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gv6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gv6 OCA], [http://www.ebi.ac.uk/pdbsum/2gv6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gv6 RCSB]</span>
+
-
}}
+
'''Crystal Structure of Matriptase with Inhibitor CJ-730'''
'''Crystal Structure of Matriptase with Inhibitor CJ-730'''
Line 29: Line 26:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Bode, W.]]
[[Category: Bode, W.]]
-
[[Category: complex structure]]
+
[[Category: Complex structure]]
-
[[Category: inhibitor]]
+
[[Category: Inhibitor]]
-
[[Category: matriptase]]
+
[[Category: Matriptase]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 05:34:37 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:22:04 2008''
+

Revision as of 02:34, 4 May 2008

Template:STRUCTURE 2gv6

Crystal Structure of Matriptase with Inhibitor CJ-730


Contents

Overview

Matriptase is an epithelium-derived type II transmembrane serine protease and has been implicated in the activation of substrates such as pro-HGF/SF and pro-uPA, which are likely involved in tumor progression and metastasis. Through screening, we have identified bis-basic secondary amides of sulfonylated 3-amidinophenylalanine as matriptase inhibitors. X-ray analyses of analogues 8 and 31 in complex with matriptase revealed that these inhibitors occupy, in addition to part of the previously described S4-binding site, the cleft formed by the molecular surface and the unique 60 loop of matriptase. Therefore, optimization of the inhibitors included the incorporation of appropriate sulfonyl substituents that could improve binding of these inhibitors into both characteristic matriptase subsites. The most potent derivatives inhibit matriptase highly selective with K(i) values below 5 nM. Molecular modeling revealed that their improved affinity results from interaction with the S4 site of matriptase. Analogues 8 and 59 were studied in an orthotopic xenograft mouse model of prostate cancer. Compared to control, both inhibitors reduced tumor growth, as well as tumor dissemination.

Disease

Known disease associated with this structure: Ichthyosis with hypotrichosis OMIM:[606797]

About this Structure

2GV6 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Secondary amides of sulfonylated 3-amidinophenylalanine. New potent and selective inhibitors of matriptase., Steinmetzer T, Schweinitz A, Sturzebecher A, Donnecke D, Uhland K, Schuster O, Steinmetzer P, Muller F, Friedrich R, Than ME, Bode W, Sturzebecher J, J Med Chem. 2006 Jul 13;49(14):4116-26. PMID:16821772 Page seeded by OCA on Sun May 4 05:34:37 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools