2gv8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2gv8.gif|left|200px]]
[[Image:2gv8.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2gv8 |SIZE=350|CAPTION= <scene name='initialview01'>2gv8</scene>, resolution 2.1&Aring;
+
The line below this paragraph, containing "STRUCTURE_2gv8", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2072 TrkA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK07233 PRK07233]</span>
+
{{STRUCTURE_2gv8| PDB=2gv8 | SCENE= }}
-
|RELATEDENTRY=[[1vqw|1VQW]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gv8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gv8 OCA], [http://www.ebi.ac.uk/pdbsum/2gv8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gv8 RCSB]</span>
+
-
}}
+
'''Crystal structure of flavin-containing monooxygenase (FMO) from S.pombe and NADPH cofactor complex'''
'''Crystal structure of flavin-containing monooxygenase (FMO) from S.pombe and NADPH cofactor complex'''
Line 29: Line 26:
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Swaminathan, S.]]
[[Category: Swaminathan, S.]]
-
[[Category: cofactor complex]]
+
[[Category: Cofactor complex]]
-
[[Category: fad]]
+
[[Category: Fad]]
-
[[Category: fmo]]
+
[[Category: Fmo]]
-
[[Category: nadph]]
+
[[Category: Nadph]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: New york structural genomix research consortium]]
-
[[Category: nysgxrc]]
+
[[Category: Nysgxrc]]
-
[[Category: oxygenase]]
+
[[Category: Oxygenase]]
-
[[Category: protein structure initiative]]
+
[[Category: Protein structure initiative]]
-
[[Category: psi]]
+
[[Category: Psi]]
-
[[Category: structural genomic]]
+
[[Category: Structural genomic]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 05:34:43 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:22:04 2008''
+

Revision as of 02:34, 4 May 2008

Template:STRUCTURE 2gv8

Crystal structure of flavin-containing monooxygenase (FMO) from S.pombe and NADPH cofactor complex


Overview

Elimination of nonnutritional and insoluble compounds is a critical task for any living organism. Flavin-containing monooxygenases (FMOs) attach an oxygen atom to the insoluble nucleophilic compounds to increase solubility and thereby increase excretion. Here we analyze the functional mechanism of FMO from Schizosaccharomyces pombe using the crystal structures of the wild type and protein-cofactor and protein-substrate complexes. The structure of the wild-type FMO revealed that the prosthetic group FAD is an integral part of the protein. FMO needs NADPH as a cofactor in addition to the prosthetic group for its catalytic activity. Structures of the protein-cofactor and protein-substrate complexes provide insights into mechanism of action. We propose that FMOs exist in the cell as a complex with a reduced form of the prosthetic group and NADPH cofactor, readying them to act on substrates. The 4alpha-hydroperoxyflavin form of the prosthetic group represents a transient intermediate of the monooxygenation process. The oxygenated and reduced forms of the prosthetic group help stabilize interactions with cofactor and substrate alternately to permit continuous enzyme turnover.

About this Structure

2GV8 is a Single protein structure of sequence from Schizosaccharomyces pombe. Full crystallographic information is available from OCA.

Reference

Mechanism of action of a flavin-containing monooxygenase., Eswaramoorthy S, Bonanno JB, Burley SK, Swaminathan S, Proc Natl Acad Sci U S A. 2006 Jun 27;103(26):9832-7. Epub 2006 Jun 15. PMID:16777962 Page seeded by OCA on Sun May 4 05:34:43 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools