2ici

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2ici.gif|left|200px]]
[[Image:2ici.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2ici |SIZE=350|CAPTION= <scene name='initialview01'>2ici</scene>, resolution 1.560&Aring;
+
The line below this paragraph, containing "STRUCTURE_2ici", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= speI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1314 Streptococcus pyogenes])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2ici| PDB=2ici | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ici FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ici OCA], [http://www.ebi.ac.uk/pdbsum/2ici PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ici RCSB]</span>
+
-
}}
+
'''Crystal Structure of Streptococcal Pyrogenic Exotoxin I'''
'''Crystal Structure of Streptococcal Pyrogenic Exotoxin I'''
Line 28: Line 25:
[[Category: Sundberg, E J.]]
[[Category: Sundberg, E J.]]
[[Category: Varma, A K.]]
[[Category: Varma, A K.]]
-
[[Category: streptococcal superantigen spei]]
+
[[Category: Streptococcal superantigen spei]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 07:19:45 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:42:25 2008''
+

Revision as of 04:19, 4 May 2008

Template:STRUCTURE 2ici

Crystal Structure of Streptococcal Pyrogenic Exotoxin I


Overview

Superantigens (SAgs) are potent microbial toxins that bind simultaneously to T cell receptors (TCRs) and class II major histocompatibility complex molecules, resulting in the activation and expansion of large T cell subsets and the onset of numerous human diseases. Within the bacterial SAg family, streptococcal pyrogenic exotoxin I (SpeI) has been classified as belonging to the group V SAg subclass, which are characterized by a unique, relatively conserved approximately 15 amino acid extension (amino acid residues 154 to 170 in SpeI; herein referred to as the alpha3-beta8 loop), absent in SAg groups I through IV. Here, we report the crystal structure of SpeI at 1.56 A resolution. Although the alpha3-beta8 loop in SpeI is several residues shorter than that of another group V SAg, staphylococcal enterotoxin serotype I, the C-terminal portions of these loops, which are located adjacent to the putative TCR binding site, are structurally similar. Mutagenesis and subsequent functional analysis of SpeI indicates that TCR beta-chains are likely engaged in a similar general orientation as other characterized SAgs. We show, however, that the alpha3-beta8 loop length, and the presence of key glycine residues, are necessary for optimal activation of T cells. Based on Vbeta-skewing analysis of human T cells activated with SpeI and structural models, we propose that the alpha3-beta8 loop is positioned to form productive intermolecular contacts with the TCR beta-chain, likely in framework region 3, and that these contacts are required for optimal TCR recognition by SpeI, and likely all other group V SAgs.

About this Structure

2ICI is a Single protein structure of sequence from Streptococcus pyogenes. Full crystallographic information is available from OCA.

Reference

Crystal structure of the streptococcal superantigen SpeI and functional role of a novel loop domain in T cell activation by group V superantigens., Brouillard JN, Gunther S, Varma AK, Gryski I, Herfst CA, Rahman AK, Leung DY, Schlievert PM, Madrenas J, Sundberg EJ, McCormick JK, J Mol Biol. 2007 Apr 6;367(4):925-34. Epub 2007 Jan 12. PMID:17303163 Page seeded by OCA on Sun May 4 07:19:45 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools