This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2iu4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2iu4.gif|left|200px]]
[[Image:2iu4.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2iu4 |SIZE=350|CAPTION= <scene name='initialview01'>2iu4</scene>, resolution 1.96&Aring;
+
The line below this paragraph, containing "STRUCTURE_2iu4", creates the "Structure Box" on the page.
-
|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Chain+B'>AC1</scene>
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=HIQ:1-[1,2-DIHYDROXY-1-(HYDROXYMETHYL)ETHYL]-L-HISTIDINE'>HIQ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2iu4| PDB=2iu4 | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2iu4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iu4 OCA], [http://www.ebi.ac.uk/pdbsum/2iu4 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2iu4 RCSB]</span>
+
-
}}
+
'''DIHYDROXYACETONE KINASE OPERON CO-ACTIVATOR DHA-DHAQ'''
'''DIHYDROXYACETONE KINASE OPERON CO-ACTIVATOR DHA-DHAQ'''
Line 30: Line 27:
[[Category: Erni, B.]]
[[Category: Erni, B.]]
[[Category: Srinivas, A.]]
[[Category: Srinivas, A.]]
-
[[Category: co-activator]]
+
[[Category: Co-activator]]
-
[[Category: dihydroxyacetone]]
+
[[Category: Dihydroxyacetone]]
-
[[Category: kinase]]
+
[[Category: Kinase]]
-
[[Category: lactococcus lacti]]
+
[[Category: Lactococcus lacti]]
-
[[Category: transferase]]
+
[[Category: Transferase]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 07:52:59 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:48:42 2008''
+

Revision as of 04:52, 4 May 2008

Template:STRUCTURE 2iu4

DIHYDROXYACETONE KINASE OPERON CO-ACTIVATOR DHA-DHAQ


Overview

Dihydroxyacetone (Dha) kinases are a novel family of kinases with signaling and metabolic functions. Here we report the x-ray structures of the transcriptional activator DhaS and the coactivator DhaQ and characterize their function. DhaQ is a paralog of the Dha binding Dha kinase subunit; DhaS belongs to the family of TetR repressors although, unlike all known members of this family, it is a transcriptional activator. DhaQ and DhaS form a stable complex that in the presence of Dha activates transcription of the Lactococcus lactis dha operon. Dha covalently binds to DhaQ through a hemiaminal bond with a histidine and thereby induces a conformational change, which is propagated to the surface via a cantilever-like structure. DhaS binding protects an inverted repeat whose sequence is GGACACATN6ATTTGTCC and renders two GC base pairs of the operator DNA hypersensitive to DNase I cleavage. The proximal half-site of the inverted repeat partially overlaps with the predicted -35 consensus sequence of the dha promoter.

About this Structure

2IU4 is a Single protein structure of sequence from Lactococcus lactis. Full crystallographic information is available from OCA.

Reference

Regulation of the Dha operon of Lactococcus lactis: a deviation from the rule followed by the Tetr family of transcription regulators., Christen S, Srinivas A, Bahler P, Zeller A, Pridmore D, Bieniossek C, Baumann U, Erni B, J Biol Chem. 2006 Aug 11;281(32):23129-37. Epub 2006 Jun 7. PMID:16760471 Page seeded by OCA on Sun May 4 07:52:59 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools