2jdk

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[[Image:2jdk.gif|left|200px]]
[[Image:2jdk.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 2jdk |SIZE=350|CAPTION= <scene name='initialview01'>2jdk</scene>, resolution 1.10&Aring;
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The line below this paragraph, containing "STRUCTURE_2jdk", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:T45+Binding+Site+For+Chain+C'>AC1</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=T45:METHYL+2H-1,2,3-TRIAZOLE-4-CARBOXYLATE'>T45</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_2jdk| PDB=2jdk | SCENE= }}
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|RELATEDENTRY=[[1gzt|1GZT]], [[1our|1OUR]], [[1ous|1OUS]], [[1oux|1OUX]], [[1ovp|1OVP]], [[1ovs|1OVS]], [[1oxc|1OXC]], [[1uzv|1UZV]], [[1w43|1W43]], [[1w8f|1W8F]], [[1w8h|1W8H]], [[2boj|2BOJ]], [[2bp6|2BP6]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jdk OCA], [http://www.ebi.ac.uk/pdbsum/2jdk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2jdk RCSB]</span>
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}}
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'''LECTIN PA-IIL OF P.AERUGINOSA COMPLEXED WITH DISACCHARIDE DERIVATIVE'''
'''LECTIN PA-IIL OF P.AERUGINOSA COMPLEXED WITH DISACCHARIDE DERIVATIVE'''
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[[Category: Sabin, C.]]
[[Category: Sabin, C.]]
[[Category: Wimmerova, M.]]
[[Category: Wimmerova, M.]]
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[[Category: cystic fibrosis]]
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[[Category: Cystic fibrosis]]
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[[Category: glycomimetic]]
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[[Category: Glycomimetic]]
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[[Category: lectin]]
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[[Category: Lectin]]
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[[Category: pseudomonas aeruginosa]]
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[[Category: Pseudomonas aeruginosa]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 08:44:28 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:56:35 2008''
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Revision as of 05:44, 4 May 2008

Template:STRUCTURE 2jdk

LECTIN PA-IIL OF P.AERUGINOSA COMPLEXED WITH DISACCHARIDE DERIVATIVE


Overview

Pseudomonas aeruginosa is an opportunistic bacterium showing increasing resistance to antibiotics and consequently represents elevated threatening problems in hospital environments, particularly for cystic fibrosis patients. The use of glycomimetics as an anti-adhesive strategy against microorganisms may complement the use of antibiotics. PA-IIL lectin (LecB) from P. aeruginosa constitutes an appealing target for antibacterial agents, as it has been proposed to play a key role in binding to airway epithelia and/or to be involved in biofilm formation. The lectin has an unusually high affinity for L-fucose and related oligosaccharides. In the work presented herein, the disaccharide alphaFuc1-4GlcNAc is used as a scaffold toward the synthesis of a series of glycomimetic derivatives. Microcalorimetry and structural studies indicate that several of the derivatives are potent inhibitors of the lectin, with affinity in the same range as the best known natural ligand, Lewis a, and could represent interesting leads for the development of future antibacterial compounds.

About this Structure

2JDK is a Single protein structure of sequence from Pseudomonas aeruginosa. Full crystallographic information is available from OCA.

Reference

X-ray Structures and Thermodynamics of the Interaction of PA-IIL from Pseudomonas aeruginosa with Disaccharide Derivatives., Marotte K, Sabin C, Preville C, Moume-Pymbock M, Wimmerova M, Mitchell EP, Imberty A, Roy R, ChemMedChem. 2007 Sep 10;2(9):1328-1338. PMID:17623286 Page seeded by OCA on Sun May 4 08:44:28 2008

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