6q21

From Proteopedia

---

Revision as of 21:46, 12 November 2007

proteopedia linkproteopedia link

spinqualitylabelsall models 6q21, resolution 1.95Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

MOLECULAR SWITCH FOR SIGNAL TRANSDUCTION: STRUCTURAL DIFFERENCES BETWEEN ACTIVE AND INACTIVE FORMS OF PROTOONCOGENIC RAS PROTEINS

Contents 1 Overview 2 Disease 3 About this Structure 4 Reference

Overview

Ras proteins participate as a molecular switch in the early steps of the, signal transduction pathway that is associated with cell growth and, differentiation. When the protein is in its GTP complexed form it is, active in signal transduction, whereas it is inactive in its GDP complexed, form. A comparison of eight three-dimensional structures of ras proteins, in four different crystal lattices, five with a nonhydrolyzable GTP analog, and three with GDP, reveals that the "on" and "off" states of the switch, are distinguished by conformational differences that span a length of more, than 40 A, and are induced by the gamma-phosphate. The most significant, differences are localized in two regions: residues 30 to 38 (the switch I, region) in the second loop and residues 60 to 76 (the switch II region), consisting of the fourth loop and the short alpha-helix that follows the, loop. Both regions are highly exposed and form a continuous strip on the, molecular surface most likely to be the recognition sites for the effector, and receptor molecule(or molecules). The conformational differences also, provide a structural basis for understanding the biological and, biochemical changes of the proteins due to oncogenic mutations, autophosphorylation, and GTP hydrolysis, and for understanding the, interactions with other proteins.

Disease

Known diseases associated with this structure: Bladder cancer, somatic OMIM:[190020], Costello syndrome OMIM:[190020], Thyroid carcinoma, follicular, somatic OMIM:[190020]

About this Structure

6Q21 is a Single protein structure of sequence from Homo sapiens with MG and GCP as ligands. Full crystallographic information is available from OCA.

Reference

Molecular switch for signal transduction: structural differences between active and inactive forms of protooncogenic ras proteins., Milburn MV, Tong L, deVos AM, Brunger A, Yamaizumi Z, Nishimura S, Kim SH, Science. 1990 Feb 23;247(4945):939-45. PMID:2406906

Page seeded by OCA on Mon Nov 12 23:52:55 2007