We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

2o5v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2o5v.gif|left|200px]]
[[Image:2o5v.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2o5v |SIZE=350|CAPTION= <scene name='initialview01'>2o5v</scene>, resolution 1.61&Aring;
+
The line below this paragraph, containing "STRUCTURE_2o5v", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= recF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1299 Deinococcus radiodurans])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2o5v| PDB=2o5v | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o5v OCA], [http://www.ebi.ac.uk/pdbsum/2o5v PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2o5v RCSB]</span>
+
-
}}
+
'''Recombination mediator RecF'''
'''Recombination mediator RecF'''
Line 27: Line 24:
[[Category: Korolev, S.]]
[[Category: Korolev, S.]]
[[Category: Koroleva, O.]]
[[Category: Koroleva, O.]]
-
[[Category: abc atpase]]
+
[[Category: Abc atpase]]
-
[[Category: p-loop]]
+
[[Category: P-loop]]
-
[[Category: signature motif]]
+
[[Category: Signature motif]]
-
[[Category: walker a motif]]
+
[[Category: Walker a motif]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 10:22:00 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:13:09 2008''
+

Revision as of 07:22, 4 May 2008

Template:STRUCTURE 2o5v

Recombination mediator RecF


Overview

RecF, together with RecO and RecR, belongs to a ubiquitous group of recombination mediators (RMs) that includes eukaryotic proteins such as Rad52 and BRCA2. RMs help maintain genome stability in the presence of DNA damage by loading RecA-like recombinases and displacing single-stranded DNA-binding proteins. Here, we present the crystal structure of RecF from Deinococcus radiodurans. RecF exhibits a high degree of structural similarity with the head domain of Rad50, but lacks its long coiled-coil region. The structural homology between RecF and Rad50 is extensive, encompassing the ATPase subdomain and the so-called 'Lobe II' subdomain of Rad50. The pronounced structural conservation between bacterial RecF and evolutionarily diverged eukaryotic Rad50 implies a conserved mechanism of DNA binding and recognition of the boundaries of double-stranded DNA regions. The RecF structure, mutagenesis of conserved motifs and ATP-dependent dimerization of RecF are discussed with respect to its role in promoting presynaptic complex formation at DNA damage sites.

About this Structure

2O5V is a Single protein structure of sequence from Deinococcus radiodurans. Full crystallographic information is available from OCA.

Reference

Structural conservation of RecF and Rad50: implications for DNA recognition and RecF function., Koroleva O, Makharashvili N, Courcelle CT, Courcelle J, Korolev S, EMBO J. 2007 Feb 7;26(3):867-77. Epub 2007 Jan 25. PMID:17255941 Page seeded by OCA on Sun May 4 10:22:00 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools