2o6d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2o6d.gif|left|200px]]
[[Image:2o6d.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2o6d |SIZE=350|CAPTION= <scene name='initialview01'>2o6d</scene>, resolution 1.860&Aring;
+
The line below this paragraph, containing "STRUCTURE_2o6d", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= tpd ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160 Treponema pallidum])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2o6d| PDB=2o6d | SCENE= }}
-
|RELATEDENTRY=[[2o6c|2O6C]], [[2o6e|2O6E]], [[2o6f|2O6F]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o6d OCA], [http://www.ebi.ac.uk/pdbsum/2o6d PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2o6d RCSB]</span>
+
-
}}
+
'''Structure of native rTp34 from Treponema pallidum'''
'''Structure of native rTp34 from Treponema pallidum'''
Line 31: Line 28:
[[Category: Norgard, M V.]]
[[Category: Norgard, M V.]]
[[Category: Tomchick, D R.]]
[[Category: Tomchick, D R.]]
-
[[Category: dimer]]
+
[[Category: Dimer]]
-
[[Category: ig-fold]]
+
[[Category: Ig-fold]]
-
[[Category: metal-ion binding]]
+
[[Category: Metal-ion binding]]
-
[[Category: syphili]]
+
[[Category: Syphili]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 10:22:58 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:13:22 2008''
+

Revision as of 07:22, 4 May 2008

Template:STRUCTURE 2o6d

Structure of native rTp34 from Treponema pallidum


Overview

The Tp34 (TP0971) membrane lipoprotein of Treponema pallidum, an obligate human pathogen and the agent of syphilis, was previously reported to have lactoferrin binding properties. Given the non-cultivatable nature of T. pallidum, a structure-to-function approach was pursued to clarify further potential relationships between the Tp34 structural and biochemical properties and its propensity to bind human lactoferrin. The crystal structure of a nonacylated, recombinant form of Tp34 (rTp34), solved to a resolution of 1.9A(,) revealed two metaloccupied binding sites within a dimer; the identity of the ion most likely was zinc. Residues from both of the monomers contributed to the interfacial metal-binding sites; a novel feature was that the delta-sulfur of methionine coordinated the zinc ion. Analytical ultracentrifugation showed that, in solution, rTp34 formed a metal-stabilized dimer and that rTp34 bound human lactoferrin with a stoichiometry of 2:1. Isothermal titration calorimetry further revealed that rTp34 bound human lactoferrin at high (submicromolar) affinity. Finally, membrane topology studies revealed that native Tp34 is not located on the outer surface (outer membrane) of T. pallidum but, rather, is periplasmic. How propensity of Tp34 to bind zinc and the iron-sequestering lactoferrin may relate overall to the biology of T. pallidum infection in humans is discussed.

About this Structure

2O6D is a Single protein structure of sequence from Treponema pallidum. Full crystallographic information is available from OCA.

Reference

Crystal structure of the Tp34 (TP0971) lipoprotein of treponema pallidum: implications of its metal-bound state and affinity for human lactoferrin., Deka RK, Brautigam CA, Tomson FL, Lumpkins SB, Tomchick DR, Machius M, Norgard MV, J Biol Chem. 2007 Feb 23;282(8):5944-58. Epub 2006 Dec 27. PMID:17192261 Page seeded by OCA on Sun May 4 10:22:58 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools