2p6p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2p6p.jpg|left|200px]]
[[Image:2p6p.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2p6p |SIZE=350|CAPTION= <scene name='initialview01'>2p6p</scene>, resolution 1.88&Aring;
+
The line below this paragraph, containing "STRUCTURE_2p6p", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= urdGT2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1906 Streptomyces fradiae])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2p6p| PDB=2p6p | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p6p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p6p OCA], [http://www.ebi.ac.uk/pdbsum/2p6p PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2p6p RCSB]</span>
+
-
}}
+
'''X-ray crystal structure of C-C bond-forming dTDP-D-Olivose-transferase UrdGT2'''
'''X-ray crystal structure of C-C bond-forming dTDP-D-Olivose-transferase UrdGT2'''
Line 19: Line 16:
==About this Structure==
==About this Structure==
-
2P6P is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Streptomyces_fradiae Streptomyces fradiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6P OCA].
+
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6P OCA].
==Reference==
==Reference==
Structure and action of the C-C bond-forming glycosyltransferase UrdGT2 involved in the biosynthesis of the antibiotic urdamycin., Mittler M, Bechthold A, Schulz GE, J Mol Biol. 2007 Sep 7;372(1):67-76. Epub 2007 Jun 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17640665 17640665]
Structure and action of the C-C bond-forming glycosyltransferase UrdGT2 involved in the biosynthesis of the antibiotic urdamycin., Mittler M, Bechthold A, Schulz GE, J Mol Biol. 2007 Sep 7;372(1):67-76. Epub 2007 Jun 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17640665 17640665]
-
[[Category: Protein complex]]
 
-
[[Category: Streptomyces fradiae]]
 
[[Category: Bechthold, A.]]
[[Category: Bechthold, A.]]
[[Category: Mittler, M.]]
[[Category: Mittler, M.]]
[[Category: Schulz, G E.]]
[[Category: Schulz, G E.]]
-
[[Category: c-glycosyltransferase,dtdp-d-olivose-transferase,polyketide aglycon]]
+
[[Category: C-glycosyltransferase,dtdp-d-olivose-transferase,polyketide aglycon]]
-
[[Category: gt-b family]]
+
[[Category: Gt-b family]]
-
[[Category: x-ray-diffraction,urdamycina-biosynthesis]]
+
[[Category: X-ray-diffraction,urdamycina-biosynthesis]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 12:29:45 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:30:56 2008''
+

Revision as of 09:29, 4 May 2008

Template:STRUCTURE 2p6p

X-ray crystal structure of C-C bond-forming dTDP-D-Olivose-transferase UrdGT2


Overview

The glycosyltransferase UrdGT2 from Streptomyces fradiae catalyzes the formation of a glycosidic C-C bond between a polyketide aglycone and D-olivose. The enyzme was expressed in Escherichia coli, purified and crystallized. Its structure was established by X-ray diffraction at 1.9 A resolution. It is the first structure of a C-glycosyltransferase. UrdGT2 belongs to the structural family GT-B of the glycosyltransferases and is likely to form a C(2)-symmetric dimer in solution. The binding structures of donor and acceptor substrates in five structurally homologous enzymes provided a clear and consistent guide for the substrate-binding structure in UrdGT2. The modeled substrate locations suggest the deeply buried Asp137 as the activator for C-C bond formation and explain the reaction. The putative model can be used to design mutations that change the substrate specificity. Such mutants are of great interest in overcoming the increasing danger of antibiotic resistance.

About this Structure

Full crystallographic information is available from OCA.

Reference

Structure and action of the C-C bond-forming glycosyltransferase UrdGT2 involved in the biosynthesis of the antibiotic urdamycin., Mittler M, Bechthold A, Schulz GE, J Mol Biol. 2007 Sep 7;372(1):67-76. Epub 2007 Jun 9. PMID:17640665 Page seeded by OCA on Sun May 4 12:29:45 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools