2ped

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[[Image:2ped.gif|left|200px]]
[[Image:2ped.gif|left|200px]]
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{{Structure
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|PDB= 2ped |SIZE=350|CAPTION= <scene name='initialview01'>2ped</scene>, resolution 2.95&Aring;
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The line below this paragraph, containing "STRUCTURE_2ped", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=HTG:HEPTYL+1-THIOHEXOPYRANOSIDE'>HTG</scene>, <scene name='pdbligand=HTO:HEPTANE-1,2,3-TRIOL'>HTO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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|ACTIVITY=
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|GENE=
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|DOMAIN=
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{{STRUCTURE_2ped| PDB=2ped | SCENE= }}
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|RELATEDENTRY=[[1u19|1U19]], [[2g87|2G87]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ped FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ped OCA], [http://www.ebi.ac.uk/pdbsum/2ped PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ped RCSB]</span>
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}}
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'''Crystallographic model of 9-cis-rhodopsin'''
'''Crystallographic model of 9-cis-rhodopsin'''
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[[Category: Nakamichi, H.]]
[[Category: Nakamichi, H.]]
[[Category: Okada, T.]]
[[Category: Okada, T.]]
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[[Category: g protein-coupled receptor]]
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[[Category: G protein-coupled receptor]]
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[[Category: rhodopsin]]
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[[Category: Rhodopsin]]
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[[Category: signaling protein]]
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[[Category: Signaling protein]]
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[[Category: visual pigment]]
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[[Category: Visual pigment]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 12:57:24 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:34:44 2008''
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Revision as of 09:57, 4 May 2008

Image:2ped.gif

Template:STRUCTURE 2ped

Crystallographic model of 9-cis-rhodopsin


Overview

The primary photochemical process of the visual function has been investigated using the three crystallographic models, 11-cis-rhodopsin, all-trans-bathorhodopsin, and the artificial isomeric 9-cis-rhodopsin. Detailed examination of the atomic displacements and dihedral angle changes of the retinal chromophore involved in the interconversion among these isomers suggests the mechanism of isomerization efficiency.

About this Structure

2PED is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Reference

Photoisomerization mechanism of rhodopsin and 9-cis-rhodopsin revealed by x-ray crystallography., Nakamichi H, Buss V, Okada T, Biophys J. 2007 Jun 15;92(12):L106-8. Epub 2007 Apr 20. PMID:17449675 Page seeded by OCA on Sun May 4 12:57:24 2008

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OCA

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