2pi0

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[[Image:2pi0.gif|left|200px]]
[[Image:2pi0.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 2pi0 |SIZE=350|CAPTION= <scene name='initialview01'>2pi0</scene>, resolution 2.31&Aring;
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The line below this paragraph, containing "STRUCTURE_2pi0", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE= IRF3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
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|DOMAIN=
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{{STRUCTURE_2pi0| PDB=2pi0 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pi0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pi0 OCA], [http://www.ebi.ac.uk/pdbsum/2pi0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pi0 RCSB]</span>
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'''Crystal Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-B enhancer'''
'''Crystal Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-B enhancer'''
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[[Category: Leyi, S.]]
[[Category: Leyi, S.]]
[[Category: Nistal-Villan, E.]]
[[Category: Nistal-Villan, E.]]
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[[Category: interferon]]
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[[Category: Interferon]]
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[[Category: protein-dna complex]]
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[[Category: Protein-dna complex]]
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[[Category: transcription]]
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[[Category: Transcription]]
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[[Category: transcription activator/dna complex]]
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[[Category: Transcription activator/dna complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 13:08:52 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:36:07 2008''
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Revision as of 10:08, 4 May 2008

Template:STRUCTURE 2pi0

Crystal Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-B enhancer


Overview

Interferon regulatory factor 3 (IRF-3) is a key transcription factor in the assembly of the mammalian interferon-beta (IFN-beta) enhanceosome. We present here the structure of IRF-3 DNA binding domain in complex with the complete PRDIII-I regulatory element of the human IFN-beta enhancer. We show that four IRF-3 molecules bind in tandem to, variably spaced, consensus and nonconsensus IRF sites on the composite element. The ability of IRF-3 to bind these variable sites derives in part from two nonconserved arginines (Arg78 and Arg86) that partake in alternate protein-DNA contacts. We also show that the protein-DNA contacts are highly overlapped and that all four IRF sites are required for gene activation in vivo. In addition, we show that changing the nonconsensus IRF sites to consensus sites creates a more efficient enhancer in vivo. Together, the structure and accompanying biological data provide insights into the assembly of the IFN-beta enhanceosome in mammals.

About this Structure

2PI0 is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-beta enhancer., Escalante CR, Nistal-Villan E, Shen L, Garcia-Sastre A, Aggarwal AK, Mol Cell. 2007 Jun 8;26(5):703-16. PMID:17560375 Page seeded by OCA on Sun May 4 13:08:52 2008

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