2qx1

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[[Image:2qx1.jpg|left|200px]]
[[Image:2qx1.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 2qx1 |SIZE=350|CAPTION= <scene name='initialview01'>2qx1</scene>, resolution 2.60&Aring;
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The line below this paragraph, containing "STRUCTURE_2qx1", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Coa+Binding+Site+For+Residue+A+962'>AC1</scene>, <scene name='pdbsite=AC2:D1t+Binding+Site+For+Residue+A+963'>AC2</scene> and <scene name='pdbsite=AC3:D1t+Binding+Site+For+Residue+B+963'>AC3</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=D1T:DECANE-1-THIOL'>D1T</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-acyl-carrier-protein_synthase_I Beta-ketoacyl-acyl-carrier-protein synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= fabH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis])
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-->
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|DOMAIN=
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{{STRUCTURE_2qx1| PDB=2qx1 | SCENE= }}
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|RELATEDENTRY=[[1u6s|1U6S]], [[1hzp|1HZP]], [[1u6e|1U6E]], [[1hnj|1HNJ]], [[1hnk|1HNK]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qx1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qx1 OCA], [http://www.ebi.ac.uk/pdbsum/2qx1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qx1 RCSB]</span>
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}}
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'''Crystal structure of the complex between mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthase III (FABH) and decyl-COA disulfide'''
'''Crystal structure of the complex between mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthase III (FABH) and decyl-COA disulfide'''
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[[Category: Scarsdale, J N.]]
[[Category: Scarsdale, J N.]]
[[Category: Wright, H T.]]
[[Category: Wright, H T.]]
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[[Category: acyltransferase]]
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[[Category: Acyltransferase]]
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[[Category: cytoplasm]]
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[[Category: Cytoplasm]]
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[[Category: enzyme inhibitor complex]]
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[[Category: Enzyme inhibitor complex]]
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[[Category: fatty acid biosynthesis]]
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[[Category: Fatty acid biosynthesis]]
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[[Category: lipid synthesis]]
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[[Category: Lipid synthesis]]
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[[Category: mechanism based inhibitor]]
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[[Category: Mechanism based inhibitor]]
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[[Category: multifunctional enzyme]]
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[[Category: Multifunctional enzyme]]
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[[Category: myobacterium tuberculosis]]
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[[Category: Myobacterium tuberculosis]]
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[[Category: structural basis for substrate specificity]]
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[[Category: Structural basis for substrate specificity]]
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[[Category: transferase]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 15:51:19 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:54:21 2008''
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Revision as of 12:51, 4 May 2008

Template:STRUCTURE 2qx1

Crystal structure of the complex between mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthase III (FABH) and decyl-COA disulfide


Overview

The dimeric Mycobacterium tuberculosis FabH (mtFabH) catalyses a Claisen-type condensation between an acyl-CoA and malonyl-acyl carrier protein (ACP) to initiate the Type II fatty acid synthase cycle. To analyze the initial covalent acylation of mtFabH with acyl-CoA, we challenged it with mixture of C(6)-C(20) acyl-CoAs and the ESI-MS analysis showed reaction at both subunits and a strict specificity for C(12) acyl CoA. Crystallographic and ESI-MS studies of mtFabH with a decyl-CoA disulfide inhibitor revealed a decyl chain bound in acyl-binding channels of both subunits through disulfide linkage to the active site cysteine. These data provide the first unequivocal evidence that both subunits of mtFabH can react with substrates or inhibitor. The discrepancy between the observed C(12) acyl-CoA substrate specificity in the initial acylation step and the higher catalytic efficiency of mtFabH for C(18)-C(20) acyl-CoA substrates in the overall mtFabH catalyzed reaction suggests a role for M. tuberculosis ACP as a specificity determinant in this reaction.

About this Structure

2QX1 is a Single protein structure of sequence from Mycobacterium tuberculosis. Full crystallographic information is available from OCA.

Reference

Probing reactivity and substrate specificity of both subunits of the dimeric Mycobacterium tuberculosis FabH using alkyl-CoA disulfide inhibitors and acyl-CoA substrates., Sachdeva S, Musayev F, Alhamadsheh MM, Neel Scarsdale J, Tonie Wright H, Reynolds KA, Bioorg Chem. 2008 Apr;36(2):85-90. Epub 2007 Dec 21. PMID:18096200 Page seeded by OCA on Sun May 4 15:51:19 2008

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