2r4b

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[[Image:2r4b.jpg|left|200px]]
[[Image:2r4b.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 2r4b |SIZE=350|CAPTION= <scene name='initialview01'>2r4b</scene>, resolution 2.40&Aring;
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The line below this paragraph, containing "STRUCTURE_2r4b", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Gw7+Binding+Site+For+Residue+A+1'>AC1</scene> and <scene name='pdbsite=AC2:Gw7+Binding+Site+For+Residue+B+1'>AC2</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=GW7:N-{3-CHLORO-4-[(3-FLUOROBENZYL)OXY]PHENYL}-6-ETHYLTHIENO[3,2-D]PYRIMIDIN-4-AMINE'>GW7</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Receptor_protein-tyrosine_kinase Receptor protein-tyrosine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 2.7.10.1] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= ERBB4, HER4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
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-->
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|DOMAIN=
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{{STRUCTURE_2r4b| PDB=2r4b | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r4b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r4b OCA], [http://www.ebi.ac.uk/pdbsum/2r4b PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2r4b RCSB]</span>
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}}
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'''ErbB4 kinase domain complexed with a thienopyrimidine inhibitor'''
'''ErbB4 kinase domain complexed with a thienopyrimidine inhibitor'''
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[[Category: Shewchuk, L M.]]
[[Category: Shewchuk, L M.]]
[[Category: Uehling, D E.]]
[[Category: Uehling, D E.]]
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[[Category: alternative splicing]]
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[[Category: Alternative splicing]]
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[[Category: atp-binding]]
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[[Category: Atp-binding]]
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[[Category: erb]]
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[[Category: Erb]]
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[[Category: glycoprotein]]
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[[Category: Glycoprotein]]
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[[Category: kinase]]
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[[Category: Kinase]]
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[[Category: membrane]]
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[[Category: Membrane]]
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[[Category: nucleotide-binding]]
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[[Category: Nucleotide-binding]]
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[[Category: phosphorylation]]
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[[Category: Phosphorylation]]
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[[Category: receptor]]
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[[Category: Receptor]]
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[[Category: transferase]]
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[[Category: Transferase]]
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[[Category: transmembrane]]
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[[Category: Transmembrane]]
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[[Category: tyrosine-protein kinase]]
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[[Category: Tyrosine-protein kinase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 16:13:17 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:56:27 2008''
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Revision as of 13:13, 4 May 2008

Template:STRUCTURE 2r4b

ErbB4 kinase domain complexed with a thienopyrimidine inhibitor


Overview

Analysis of the x-ray crystal structure of mono-substituted acetylenic thienopyrimidine 6 complexed with the ErbB family enzyme ErbB-4 revealed a covalent bond between the terminal carbon of the acetylene moiety and the sulfhydryl group of Cys-803 at the solvent interface. The identification of this covalent adduct suggested that acetylenic thienopyrimidine 6 and related analogs might also be capable of forming an analogous covalent adduct with EGFR, which has a conserved cysteine (797) near the ATP binding pocket. To test this hypothesis, we treated a truncated, catalytically competent form of EGFR (678-1020) with a structurally related propargylic amine (8). An investigation of the resulting complex by mass spectrometry revealed the formation of a covalent complex of thienopyrimidine 8 with Cys-797 of EGFR. This finding enabled us to readily assess the irreversibility of various inhibitors and also facilitated a structure-activity relationship understanding of the covalent modifying potential and biological activity of a series of acetylenic thienopyrimidine compounds with potent antitumor activity. Several ErbB family enzyme and cell potent 6-ethynyl thienopyrimidine kinase inhibitors were found to form covalent adducts with EGFR.

About this Structure

2R4B is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

6-Ethynylthieno[3,2-d]- and 6-ethynylthieno[2,3-d]pyrimidin-4-anilines as tunable covalent modifiers of ErbB kinases., Wood ER, Shewchuk LM, Ellis B, Brignola P, Brashear RL, Caferro TR, Dickerson SH, Dickson HD, Donaldson KH, Gaul M, Griffin RJ, Hassell AM, Keith B, Mullin R, Petrov KG, Reno MJ, Rusnak DW, Tadepalli SM, Ulrich JC, Wagner CD, Vanderwall DE, Waterson AG, Williams JD, White WL, Uehling DE, Proc Natl Acad Sci U S A. 2008 Feb 26;105(8):2773-8. Epub 2008 Feb 19. PMID:18287036 Page seeded by OCA on Sun May 4 16:13:17 2008

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