2v0d

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[[Image:2v0d.gif|left|200px]]
[[Image:2v0d.gif|left|200px]]
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{{Structure
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|PDB= 2v0d |SIZE=350|CAPTION= <scene name='initialview01'>2v0d</scene>, resolution 2.2&Aring;
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The line below this paragraph, containing "STRUCTURE_2v0d", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:C53+Binding+Site+For+Chain+A'>AC1</scene>
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|LIGAND= <scene name='pdbligand=C53:2-IMINO-5-(1-PYRIDIN-2-YL-METH-(E)-YLIDENE)-1,3-THIAZOLIDIN-4-ONE'>C53</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>
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{{STRUCTURE_2v0d| PDB=2v0d | SCENE= }}
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v0d OCA], [http://www.ebi.ac.uk/pdbsum/2v0d PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v0d RCSB]</span>
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}}
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'''CRYSTAL STRUCTURE OF HUMAN CDK2 COMPLEXED WITH A THIAZOLIDINONE INHIBITOR'''
'''CRYSTAL STRUCTURE OF HUMAN CDK2 COMPLEXED WITH A THIAZOLIDINONE INHIBITOR'''
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[[Category: Richardson, C M.]]
[[Category: Richardson, C M.]]
[[Category: Surgenor, A E.]]
[[Category: Surgenor, A E.]]
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[[Category: atp-binding]]
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[[Category: Atp-binding]]
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[[Category: cdk2]]
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[[Category: Cdk2]]
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[[Category: cell cycle]]
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[[Category: Cell cycle]]
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[[Category: cell division]]
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[[Category: Cell division]]
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[[Category: cyclin]]
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[[Category: Cyclin]]
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[[Category: kinase]]
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[[Category: Kinase]]
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[[Category: mitosis]]
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[[Category: Mitosis]]
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[[Category: nucleotide- binding]]
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[[Category: Nucleotide- binding]]
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[[Category: nucleotide-binding]]
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[[Category: Nucleotide-binding]]
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[[Category: phosphorylation]]
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[[Category: Phosphorylation]]
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[[Category: serine/threonine-protein kinase]]
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[[Category: Serine/threonine-protein kinase]]
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[[Category: thiazolidinone ligand]]
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[[Category: Thiazolidinone ligand]]
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[[Category: transferase]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 17:57:19 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:06:57 2008''
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Revision as of 14:57, 4 May 2008

Image:2v0d.gif

Template:STRUCTURE 2v0d

CRYSTAL STRUCTURE OF HUMAN CDK2 COMPLEXED WITH A THIAZOLIDINONE INHIBITOR


Overview

Virtual screening against a pCDK2/cyclin A crystal structure led to the identification of a potent and novel CDK2 inhibitor, which exhibited an unusual mode of interaction with the kinase binding motif. With the aid of X-ray crystallography and modelling, a medicinal chemistry strategy was implemented to probe the interactions seen in the crystal structure and to establish SAR. A fragment-based approach was also considered but a different, more conventional, binding mode was observed. Compound selectivity against GSK-3beta was improved using a rational design strategy, with crystallographic verification of the CDK2 binding mode.

About this Structure

2V0D is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Discovery of a potent CDK2 inhibitor with a novel binding mode, using virtual screening and initial, structure-guided lead scoping., Richardson CM, Nunns CL, Williamson DS, Parratt MJ, Dokurno P, Howes R, Borgognoni J, Drysdale MJ, Finch H, Hubbard RE, Jackson PS, Kierstan P, Lentzen G, Moore JD, Murray JB, Simmonite H, Surgenor AE, Torrance CJ, Bioorg Med Chem Lett. 2007 Jul 15;17(14):3880-5. Epub 2007 May 6. PMID:17570665 Page seeded by OCA on Sun May 4 17:57:19 2008

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