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2vot

From Proteopedia

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(New page: 200px {{Structure |PDB= 2vot |SIZE=350|CAPTION= <scene name='initialview01'>2vot</scene>, resolution 1.95&Aring; |SITE= <scene name='pdbsite=AC1:Binding+Site+For+...)
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[[Image:2vot.jpg|left|200px]]
[[Image:2vot.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 2vot |SIZE=350|CAPTION= <scene name='initialview01'>2vot</scene>, resolution 1.95&Aring;
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The line below this paragraph, containing "STRUCTURE_2vot", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Nhv+A+1865'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Edo+A+1866'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Edo+A+1867'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Edo+A+1868'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Edo+A+1869'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Edo+A+1870'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Edo+A+1871'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Edo+A+1872'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Edo+A+1873'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Edo+A+1874'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Edo+A+1875'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Edo+A+1876'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Edo+A+1877'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Edo+A+1878'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Edo+A+1879'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Edo+A+1880'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Edo+A+1881'>BC8</scene>, <scene name='pdbsite=BC9:Binding+Site+For+Residue+Edo+A+1882'>BC9</scene>, <scene name='pdbsite=CC1:Binding+Site+For+Residue+Edo+A+1883'>CC1</scene>, <scene name='pdbsite=CC2:Binding+Site+For+Residue+Edo+A+1884'>CC2</scene>, <scene name='pdbsite=CC3:Binding+Site+For+Residue+Edo+A+1885'>CC3</scene>, <scene name='pdbsite=CC4:Binding+Site+For+Residue+Br+A+1888'>CC4</scene>, <scene name='pdbsite=CC5:Binding+Site+For+Residue+Br+A+1889'>CC5</scene>, <scene name='pdbsite=CC6:Binding+Site+For+Residue+Nhv+B+1868'>CC6</scene>, <scene name='pdbsite=CC7:Binding+Site+For+Residue+Edo+B+1869'>CC7</scene>, <scene name='pdbsite=CC8:Binding+Site+For+Residue+Edo+B+1870'>CC8</scene>, <scene name='pdbsite=CC9:Binding+Site+For+Residue+Edo+B+1871'>CC9</scene>, <scene name='pdbsite=DC1:Binding+Site+For+Residue+Edo+B+1872'>DC1</scene>, <scene name='pdbsite=DC2:Binding+Site+For+Residue+Edo+B+1873'>DC2</scene>, <scene name='pdbsite=DC3:Binding+Site+For+Residue+Edo+B+1874'>DC3</scene>, <scene name='pdbsite=DC4:Binding+Site+For+Residue+Edo+B+1875'>DC4</scene>, <scene name='pdbsite=DC5:Binding+Site+For+Residue+Edo+B+1876'>DC5</scene>, <scene name='pdbsite=DC6:Binding+Site+For+Residue+Edo+B+1877'>DC6</scene>, <scene name='pdbsite=DC7:Binding+Site+For+Residue+Edo+B+1878'>DC7</scene>, <scene name='pdbsite=DC8:Binding+Site+For+Residue+Edo+B+1879'>DC8</scene>, <scene name='pdbsite=DC9:Binding+Site+For+Residue+Edo+B+1880'>DC9</scene>, <scene name='pdbsite=EC1:Binding+Site+For+Residue+Edo+B+1881'>EC1</scene>, <scene name='pdbsite=EC2:Binding+Site+For+Residue+Edo+B+1882'>EC2</scene>, <scene name='pdbsite=EC3:Binding+Site+For+Residue+Edo+B+1883'>EC3</scene>, <scene name='pdbsite=EC4:Binding+Site+For+Residue+Edo+B+1884'>EC4</scene>, <scene name='pdbsite=EC5:Binding+Site+For+Residue+Edo+B+1885'>EC5</scene>, <scene name='pdbsite=EC6:Binding+Site+For+Residue+Edo+B+1886'>EC6</scene>, <scene name='pdbsite=EC7:Binding+Site+For+Residue+Edo+B+1887'>EC7</scene>, <scene name='pdbsite=EC8:Binding+Site+For+Residue+Edo+B+1888'>EC8</scene>, <scene name='pdbsite=EC9:Binding+Site+For+Residue+Edo+B+1889'>EC9</scene>, <scene name='pdbsite=FC1:Binding+Site+For+Residue+Br+B+1890'>FC1</scene>, <scene name='pdbsite=FC2:Binding+Site+For+Residue+Br+B+1891'>FC2</scene>, <scene name='pdbsite=FC3:Binding+Site+For+Residue+Cl+B+1894'>FC3</scene>, <scene name='pdbsite=FC4:Binding+Site+For+Residue+Edo+B+1895'>FC4</scene>, <scene name='pdbsite=FC5:Binding+Site+For+Residue+Cl+B+1896'>FC5</scene>, <scene name='pdbsite=FC6:Binding+Site+For+Residue+Edo+A+1890'>FC6</scene>, <scene name='pdbsite=FC7:Binding+Site+For+Residue+Edo+B+1897'>FC7</scene>, <scene name='pdbsite=FC8:Binding+Site+For+Residue+Edo+B+1898'>FC8</scene>, <scene name='pdbsite=FC9:Binding+Site+For+Residue+Cl+B+1899'>FC9</scene>, <scene name='pdbsite=GC1:Binding+Site+For+Residue+Edo+A+1891'>GC1</scene>, <scene name='pdbsite=GC2:Binding+Site+For+Residue+Edo+A+1892'>GC2</scene>, <scene name='pdbsite=GC3:Binding+Site+For+Residue+Edo+B+1900'>GC3</scene>, <scene name='pdbsite=GC4:Binding+Site+For+Residue+Edo+B+1901'>GC4</scene>, <scene name='pdbsite=GC5:Binding+Site+For+Residue+Edo+A+1893'>GC5</scene>, <scene name='pdbsite=GC6:Binding+Site+For+Residue+Edo+B+1902'>GC6</scene> and <scene name='pdbsite=GC7:Binding+Site+For+Residue+Edo+A+1894'>GC7</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NHV:(5R,6R,7S,8R)-6,7,8-TRIHYDROXY-5-(HYDROXYMETHYL)-2-[(PHENYLAMINO)METHYL]-5,6,7,8-TETRAHYDRO-1H-IMIDAZO[1,2-A]PYRIDIN-4-IUM'>NHV</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-mannosidase Beta-mannosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.25 3.2.1.25] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02837 Glyco_hydro_2_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3250 LacZ], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02836 Glyco_hydro_2_C]</span>
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{{STRUCTURE_2vot| PDB=2vot | SCENE= }}
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|RELATEDENTRY=[[2vqt|2VQT]], [[2vl4|2VL4]], [[2vqu|2VQU]], [[2vo5|2VO5]], [[2je8|2JE8]], [[2vjx|2VJX]], [[2vmf|2VMF]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vot FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vot OCA], [http://www.ebi.ac.uk/pdbsum/2vot PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2vot RCSB]</span>
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}}
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'''STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION STATE IN BETA-MANNOSIDASES'''
'''STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION STATE IN BETA-MANNOSIDASES'''
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[[Category: Tailford, L N.]]
[[Category: Tailford, L N.]]
[[Category: Vasella, A.]]
[[Category: Vasella, A.]]
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[[Category: glycoside hydrolase]]
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[[Category: Glycoside hydrolase]]
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[[Category: hydrolase]]
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[[Category: Hydrolase]]
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[[Category: linear free energy relationship]]
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[[Category: Linear free energy relationship]]
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[[Category: mannosidase]]
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[[Category: Mannosidase]]
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[[Category: transition state mimic]]
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[[Category: Transition state mimic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 19:05:38 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 2 11:58:41 2008''
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Revision as of 16:05, 4 May 2008

Image:2vot.jpg

Template:STRUCTURE 2vot

STRUCTURAL AND BIOCHEMICAL EVIDENCE FOR A BOAT-LIKE TRANSITION STATE IN BETA-MANNOSIDASES


About this Structure

2VOT is a Single protein structure of sequence from Bacteroides thetaiotaomicron. Full crystallographic information is available from OCA. Page seeded by OCA on Sun May 4 19:05:38 2008

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