4bir

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[[Image:4bir.gif|left|200px]]
[[Image:4bir.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 4bir |SIZE=350|CAPTION= <scene name='initialview01'>4bir</scene>, resolution 1.70&Aring;
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The line below this paragraph, containing "STRUCTURE_4bir", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=CAT:Catalytic+Site'>CAT</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_T(1) Ribonuclease T(1)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.3 3.1.27.3] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= SYNTHETIC GENE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5062 Aspergillus oryzae])
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-->
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|DOMAIN=
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{{STRUCTURE_4bir| PDB=4bir | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bir FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bir OCA], [http://www.ebi.ac.uk/pdbsum/4bir PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=4bir RCSB]</span>
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}}
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'''RIBONUCLEASE T1: FREE HIS92GLN MUTANT'''
'''RIBONUCLEASE T1: FREE HIS92GLN MUTANT'''
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Role of histidine-40 in ribonuclease T1 catalysis: three-dimensionalstructures of the partially active His40Lys mutant., Zegers I, Verhelst P, Choe HW, Steyaert J, Heinemann U, Saenger W, Wyns L, Biochemistry. 1992 Nov 24;31(46):11317-25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1445870 1445870]
Role of histidine-40 in ribonuclease T1 catalysis: three-dimensionalstructures of the partially active His40Lys mutant., Zegers I, Verhelst P, Choe HW, Steyaert J, Heinemann U, Saenger W, Wyns L, Biochemistry. 1992 Nov 24;31(46):11317-25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1445870 1445870]
[[Category: Aspergillus oryzae]]
[[Category: Aspergillus oryzae]]
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[[Category: Ribonuclease T(1)]]
 
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Doumen, J.]]
[[Category: Doumen, J.]]
[[Category: Steyaert, J.]]
[[Category: Steyaert, J.]]
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[[Category: endoribonuclease]]
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[[Category: Endoribonuclease]]
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[[Category: his to gln mutant]]
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[[Category: His to gln mutant]]
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[[Category: hydrolase]]
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[[Category: Hydrolase]]
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[[Category: ribonuclease]]
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[[Category: Ribonuclease]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 22:21:16 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:38:01 2008''
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Revision as of 19:21, 4 May 2008

Template:STRUCTURE 4bir

RIBONUCLEASE T1: FREE HIS92GLN MUTANT


Overview

Histidine-40 is known to participate in phosphodiester transesterification catalyzed by the enzyme ribonuclease T1. A mutant enzyme with a lysine replacing the histidine-40 (His40Lys RNase T1) retains considerable catalytic activity [Steyaert, J., Hallenga, K., Wyns, L., & Stanssens, P. (1990) Biochemistry 29, 9064-9072]. We report on the crystal structures of His40Lys RNase T1 containing a phosphate anion and a guanosine 2'-phosphate inhibitor in the active site, respectively. Similar to previously described structures, the phosphate-containing crystals are of space group P2(1)2(1)2(1), with one molecule per asymmetric unit (a = 48.27 A, b = 46.50 A, c = 41.14 A). The complex with 2'-GMP crystallized in the lower symmetry space group P2(1), with two molecules per asymmetric unit (a = 49.20 A, b = 48.19 A, c = 40.16 A, beta = 90.26). The crystal structures have been solved at 1.8- and 2.0-A resolution yielding R values of 14.5% and 16.0%, respectively. Comparison of these His40Lys structures with the corresponding wild-type structures, containing 2'-GMP [Arni, R., Heinemann, U., Tokuoka, R., & Saenger, W. (1988) J. Biol. Chem. 263, 15358-15368] and vanadate [Kostrewa, D., Hui-Woog Choe, Heinemann, U., & Saenger, W. (1989) Biochemistry 28, 7692-7600] in the active site, respectively, leads to the following conclusions. First, the His40Lys mutation causes no significant changes in the overall structure of RNase T1; second, the Lys40 side chains in the mutant structures occupy roughly the same space as His40 in the corresponding wild-type RNase T1 structures.(ABSTRACT TRUNCATED AT 250 WORDS)

About this Structure

4BIR is a Single protein structure of sequence from Aspergillus oryzae. Full crystallographic information is available from OCA.

Reference

Role of histidine-40 in ribonuclease T1 catalysis: three-dimensionalstructures of the partially active His40Lys mutant., Zegers I, Verhelst P, Choe HW, Steyaert J, Heinemann U, Saenger W, Wyns L, Biochemistry. 1992 Nov 24;31(46):11317-25. PMID:1445870 Page seeded by OCA on Sun May 4 22:21:16 2008

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