Protein Data Bank
From Proteopedia
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The [http://www.wwpdb.org World Wide Protein Data Bank] (wwPDB) is the internationally recognized sole repository of all published, empirically-determined macromolecular three-dimensional (3D) structure data. In 2008, it has three official branches: the Research Collaboratory for Structural Bioinformatics (USA), the European Bioinformatics Institute (UK), and the Protein Data Bank Japan. | The [http://www.wwpdb.org World Wide Protein Data Bank] (wwPDB) is the internationally recognized sole repository of all published, empirically-determined macromolecular three-dimensional (3D) structure data. In 2008, it has three official branches: the Research Collaboratory for Structural Bioinformatics (USA), the European Bioinformatics Institute (UK), and the Protein Data Bank Japan. | ||
| - | Many derivative databases '''copy, derive information from, or add value to''' the [[Atomic coordinate file | atomic coordinate files]] available from the wwPDB. | + | ==New Releases Cycle== |
| + | The wwPDB releases new entries once per week. These can be seen by clicking on the most recent release date, shown at the upper right of the main page at [http://pdb.org]. | ||
| + | |||
| + | Many derivative databases '''copy, derive information from, or add value to''' the [[Atomic coordinate file | atomic coordinate files]] available from the wwPDB. Proteopedia is one example. | ||
==More About The Protein Data Bank== | ==More About The Protein Data Bank== | ||
Revision as of 20:42, 14 June 2008
The World Wide Protein Data Bank (wwPDB) is the internationally recognized sole repository of all published, empirically-determined macromolecular three-dimensional (3D) structure data. In 2008, it has three official branches: the Research Collaboratory for Structural Bioinformatics (USA), the European Bioinformatics Institute (UK), and the Protein Data Bank Japan.
New Releases Cycle
The wwPDB releases new entries once per week. These can be seen by clicking on the most recent release date, shown at the upper right of the main page at [1].
Many derivative databases copy, derive information from, or add value to the atomic coordinate files available from the wwPDB. Proteopedia is one example.
More About The Protein Data Bank
- World Wide Protein Data Bank
- RCSB PDB
- Protein Data Bank in Wikipedia
- Protein Data Bank at PDBWiki.Org
- Berman H, Henrick K, Nakamura H, Markley JL. The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data. Nucleic Acids Res.35:D301-3. (2007) PMID:17142228.
- Berman HM et al., The Protein Data Bank, Acta Crystallogr D Biol Crystallogr.58:899-907 (2002). PMID:12037327
- H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, H. Weissig, I.N. Shindyalov, P.E. Bourne: The Protein Data Bank. Nucleic Acids Research, 28 pp. 235-242 (2000). PMID:10592235.
- Earliest Solutions for Macromolecular Crystal Structures
